Genetic Markers Predicting Response to Clostridium difficile Toxin B Treatments

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Solution Overview

Problem

Current treatments for Clostridium difficile infections (CDI) often fail to prevent recurrence, and there is a need for a method to identify patients who would benefit from therapies targeting C. difficile toxin B, such as the antibody bezlotoxumab, to improve treatment efficacy and reduce costs.

Innovation Solution

Genetic markers on human chromosome 6, including specific single nucleotide polymorphisms (SNPs) and HLA alleles, are used to predict response to treatments targeting C. difficile toxin B, allowing for personalized treatment approaches by identifying patients likely to benefit from bezlotoxumab or similar medications.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If genetic markers are used to identify patients likely to benefit from bezlotoxumab treatment, then treatment efficacy is improved, but diagnostic complexity increases

Engineering Contradiction:
Improvetreatment efficacyVSAvoiddiagnostic complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The diagnostic process is segmented into specific steps: obtaining a biological sample, extracting and amplifying DNA, detecting specific SNP genotypes (rs2516513, rs113379306, rs76166871), and comparing results to reference values. This segmentation transforms a complex diagnostic challenge into manageable, standardized procedures that can be systematically implemented.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The invention changes the diagnostic parameter from general clinical assessment to specific genetic marker detection. By focusing on particular SNP genotypes at defined chromosomal locations, the diagnosis transitions from subjective clinical judgment to objective molecular measurement, improving reliability while maintaining manageable complexity through targeted analysis.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If bezlotoxumab treatment is administered to all CDI patients, then recurrence prevention coverage is improved, but treatment cost increases

Engineering Contradiction:
Improverecurrence prevention coverageVSAvoidtreatment cost
Core Design Contradiction:
ReliabilityVSQuantity of substance

Solution Approach 1:

The treatment approach transitions from universal administration to targeted delivery based on local genetic characteristics. Patients are stratified into high-risk groups identified by specific genotype patterns, allowing bezlotoxumab to be administered locally to those who will benefit most, rather than universally to all CDI patients. This local quality approach optimizes both coverage and cost-effectiveness.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

Instead of treating all patients (excessive action), the invention applies partial treatment only to the subset of patients with high-risk genotypes. This partial action approach avoids unnecessary treatment costs for low-risk patients while maintaining adequate prevention coverage for those who need it most, achieving cost-effectiveness without sacrificing essential protection.

Inventive Principle:
Principle #16Partial or excessive action

Data Source

PatentUS12071666B2Human genetic markers associated with response to treatments that target clostridium difficile toxin B
Publication Date: 2024.08.27 MERCK SHARP & DOHME LLC
  • US12071666B2 patent drawing
  • US12071666B2 patent drawing
  • US12071666B2 patent drawing

AI summary

The present invention provides genetic markers on human chromosome 6 that are associated with a beneficial response to a treatment that targets Clostridium difficile (C. difficile) toxin B (TcdB), e.g. a TcdB antibody. These TcdB treatment response markers are useful, inter alia, to identify patients who are most likely to benefit from treatment that targets TcdB in methods of treating patients having a disease susceptible to treatment with a TcdB antibody, and in methods for selecting the most appropriate therapy for such patients. The invention also provides antibodies, drug products, and kits useful with the TcdB Treatment response markers of the invention.