GH61 Polypeptides Enhance Cellulose Hydrolysis Efficiency

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Solution Overview

Problem

Current methods for enzymatically degrading lignocellulosic feedstocks are inefficient, requiring high amounts of cellulolytic enzymes and struggling to effectively convert cellulose into glucose for ethanol production.

Innovation Solution

Development of isolated polypeptides with cellulolytic enhancing activity, such as GH61 polypeptides, which enhance the hydrolysis of cellulose by reducing the amount of cellulolytic enzymes needed, and methods for producing and using these polypeptides to improve the conversion of cellulose into glucose.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If high amounts of cellulolytic enzymes are used to degrade lignocellulosic feedstocks, then the degradation efficiency is improved, but the cost and complexity of the process increases

Engineering Contradiction:
Improvecellulose degradation efficiencyVSAvoidamount of cellulolytic enzymes required
Core Design Contradiction:
ProductivityVSQuantity of substance

Solution Approach 1:

The patent introduces polypeptides with cellulolytic enhancing activity as intermediary substances that amplify the action of cellulolytic enzymes. These polypeptides bind to cellulose substrates and facilitate enzyme attachment or activation, thereby enhancing degradation efficiency without requiring proportional increases in enzyme quantity. This mediator approach resolves the contradiction by enabling high productivity with reduced enzyme consumption.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent modifies the chemical or physical parameters of the degradation system by introducing polypeptides that alter the interaction between cellulolytic enzymes and cellulose substrates. These polypeptides may change binding affinity, enzymatic activity, or substrate accessibility parameters, thereby improving degradation efficiency while reducing the required enzyme concentration. This parameter modification strategy addresses the contradiction between productivity and substance quantity.

Inventive Principle:
Principle #35Parameter changes

2Productivity

If high amounts of cellulolytic enzymes are used to convert cellulose into glucose, then the conversion efficiency is improved, but the cost of ethanol production increases

Engineering Contradiction:
Improvecellulose to glucose conversion efficiencyVSAvoidamount of cellulolytic enzymes required
Core Design Contradiction:
ProductivityVSQuantity of substance

Solution Approach 1:

The polypeptides act as intermediaries that enhance the catalytic conversion of cellulose to glucose by cellulolytic enzymes. By binding to the substrate or enzyme, these polypeptides increase the effectiveness of each enzyme molecule, thereby improving conversion efficiency while reducing the total enzyme quantity needed. This reduces the cost burden on ethanol production while maintaining high productivity.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent may involve producing multiple copies of the polypeptide encoding gene or using recombinant methods to generate abundant polypeptide copies that can be applied to the degradation process. This copying strategy ensures sufficient polypeptide availability to enhance enzyme activity across large-scale ethanol production, addressing both conversion efficiency and cost reduction goals.

Inventive Principle:
Principle #26Copying

3Productivity

If current enzymatic degradation methods are used, then the process is simple, but the ability to effectively convert lignocellulosic feedstocks is insufficient

Engineering Contradiction:
Improvelignocellulosic feedstock conversion abilityVSAvoidenzymatic degradation system complexity
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The introduction of polypeptides as mediaries enhances feedstock conversion ability by improving enzyme-substrate interactions. While this adds a component to the system, the polypeptides can be produced through recombinant DNA technology in existing microbial hosts, thereby limiting the increase in overall system complexity. The benefit in conversion efficiency outweighs the moderate increase in system complexity.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The polypeptides may possess multiple functions including substrate binding, enzyme activation, and process enhancement, thereby achieving improved feedstock conversion with a single additive rather than requiring multiple separate components. This multi-functionality reduces the practical complexity increase while maximizing productivity improvement.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The polypeptides significantly enhance the hydrolysis of cellulose, reducing the enzyme requirement by up to 20-fold, thereby improving the efficiency of converting lignocellulosic materials into ethanol.

Implementation Method 1

enzymes that hydrolyze beta-linked glucans

Methodology Applied
Scientific EffectHydrolysis: Hydrolysis

Implementation Method 2

endoglucanases, cellobiohydrolases, and beta-glucosidases

Methodology Applied
Scientific EffectEnzyme catalysis: Enzyme

Implementation Method 3

polypeptides having cellulolytic enhancing activity which enhance the hydrolysis of cellulose

Methodology Applied
Scientific EffectEnhanced enzymatic activity: Enzyme

Data Source

PatentUS9506049B2Polypeptides having cellulolytic enhancing activity and polynucleotides encoding same
Publication Date: 2016.11.29 NOVOZYMES AS
  • US9506049B2 patent drawing
  • US9506049B2 patent drawing
  • US9506049B2 patent drawing

AI summary

The present invention relates to isolated polypeptides having cellulolytic enhancing activity and isolated polynucleotides encoding the polypeptides. The invention also relates to nucleic acid constructs, vectors, and host cells comprising the polynucleotides as well as methods of producing and using the polypeptides.