GSC Synthesis via Segmented 14-Step Protection Strategy

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Solution Overview

Problem

Current methods for synthesizing cytidine-5′-monophospho-N-glycyl-sialic acid (GSC) are inefficient and lack a comprehensive, reliable process for producing high yields.

Innovation Solution

A 14-step process involving benzylation, acetylation, thiophenol introduction, Boc protection, deacetylation, Boc deprotection, TFA-Gly introduction, thiophenol removal, phosphite introduction, oxidation, debenzylation, triacetyl-cytidine coupling, and acetyl and trifluoroacetamide deprotection reactions is developed to synthesize GSC from N-Acetylneuraminic acid.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If current synthesis methods are used, then the synthesis process can be completed, but the yield and efficiency are insufficient

Engineering Contradiction:
Improvesynthesis efficiencyVSAvoidsynthesis yield
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The synthesis process is divided into 14 distinct steps including benzylation, acetylation, thiophenol introduction, Boc protection, deacetylation, Boc deprotection, TFA-Gly introduction, thiophenol removal, phosphite introduction, oxidation, debenzylation, triacetyl-cytidine coupling, and acetyl and trifluoroacetamide deprotection. This segmentation allows each reaction to be optimized and controlled independently, improving both yield and efficiency

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

Protecting groups (benzyl, acetyl, Boc) are introduced in advance to prevent unwanted side reactions during intermediate steps. These preliminary protective actions ensure that sensitive functional groups remain intact until the appropriate stage, thereby improving overall synthesis reliability and yield

Inventive Principle:
Principle #10Preliminary action

2Reliability

If a comprehensive synthesis process is developed, then high yields can be achieved, but the process complexity increases

Engineering Contradiction:
Improvesynthesis yieldVSAvoidprocess complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

Different reaction conditions (temperature, solvent, catalysts, pH) are optimized for each of the 14 synthesis steps. By carefully controlling parameters such as using cesium carbonate for benzylation, specific acetylation conditions, and controlled oxidation conditions, high yields are achieved while managing process complexity through systematic parameter optimization

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

Multiple intermediate compounds are formed with specific protecting groups (benzyl, acetyl, Boc) that facilitate subsequent reactions. These intermediates act as mediators that enable the complex synthesis to proceed through manageable stages, with each intermediate designed to enable the next transformation while protecting sensitive functionality

Inventive Principle:
Principle #24Intermediary (Mediator)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This process provides a systematic and effective method for producing GSC, enhancing yield and efficiency by breaking down the synthesis into specific, controlled chemical reactions.

Implementation Method 1

Benzylation of N-Acetylneuraminic acid

Methodology Applied
Scientific EffectNucleophilic substitution: Chemical Bonding

Implementation Method 2

Cesium Carbonate

Methodology Applied
Scientific EffectBase catalysis: Catalysis

Implementation Method 3

Acetylation of Intermediate 1

Methodology Applied
Scientific EffectAcetylation: Chemical Bonding

Implementation Method 4

Boron trifluoride diethyl etherate

Methodology Applied
Scientific EffectLewis acid catalysis: Catalysis

Implementation Method 5

Boc Protection of Intermediate 3

Methodology Applied
Scientific EffectCarbamate formation: Chemical Bonding

Implementation Method 6

Decetylation of intermediate 4

Methodology Applied
Scientific EffectHydrazine deacetylation: Chemical Bonding

Implementation Method 7

Acetylation of Intermediate 5

Methodology Applied
Scientific EffectAcetylation: Chemical Bonding

Implementation Method 8

Oxidation of Intermediate 10

Methodology Applied
Scientific EffectOxidation: Oxidation

Implementation Method 9

Debenzylation of Intermediate 11

Methodology Applied
Scientific EffectCatalytic hydrogenation: Catalysis

Data Source

PatentUS20240327447A1Chemical synthesis of cytidine-5'-monophospho-n-glycyl-sialic acid
Publication Date: 2024.10.03 89BIO INC
  • US20240327447A1 patent drawing
  • US20240327447A1 patent drawing
  • US20240327447A1 patent drawing

AI summary

Aspects of the present disclosure provide methods for the chemical synthesis of cytidine-5′-monophospho-N-glycyl-sialic acid (GSC).