Host-Targeted Compounds Inhibiting SARS-CoV-2 Entry

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Solution Overview

Problem

Current therapies for COVID-19 lack effective solutions to inhibit SARS-CoV-2 entry into cells and manage hyperinflammation, highlighting a need for host-targeted therapies that can induce antiviral and anti-cytokine responses to constrain viral spread.

Innovation Solution

The development of compounds and compositions that identify and utilize host-targeted antiviral and anti-inflammatory agents, such as imipramine, salmeterol, and hexylresorcinol, to stimulate antiviral and anti-cytokine signatures, inhibit viral entry, and reduce hyperinflammation by constructing protein-protein interaction networks and conducting in vitro assays.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If host-targeted therapies are developed to induce antiviral and anti-cytokine responses, then viral spread can be constrained, but the complexity of identifying and developing effective compounds increases

Engineering Contradiction:
Improveeffectiveness of antiviral therapyVSAvoidcomplexity of compound identification process
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent performs preliminary computational analysis by obtaining transcriptomic data from infected cells, identifying differentially expressed genes, and characterizing host-targeted antiviral and anti-cytokine signatures before conducting experimental assays. This preliminary bioinformatic screening prioritizes compounds for in vitro testing, reducing the complexity of the overall development process.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent uses an intermediary computational framework that integrates transcriptomic data, protein-protein interaction networks, and compound-target interactions. This intermediary system mediates between the complex biological system and the drug discovery process, enabling systematic evaluation of host-targeted therapies without requiring direct manipulation of every biological variable.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Reliability

If compounds are screened to inhibit viral entry and reduce hyperinflammation, then therapeutic effectiveness improves, but the time required for compound identification and validation increases

Engineering Contradiction:
Improvetherapeutic effectivenessVSAvoidtime for compound identification
Core Design Contradiction:
ReliabilityVSLoss of time

Solution Approach 1:

The patent performs preliminary computational screening using transcriptomic data and protein-protein interaction networks to prioritize compounds before experimental validation. This preliminary action filters and ranks potential therapeutics based on their predicted ability to inhibit viral entry or reduce hyperinflammation, significantly reducing the time required for comprehensive compound screening.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent employs feedback loops where in vitro assay results feed back into the computational modeling to refine compound prioritization. This iterative feedback process allows continuous improvement of the screening criteria, accelerating the identification of effective compounds while maintaining high therapeutic reliability.

Inventive Principle:
Principle #23Feedback

Data Source

PatentUS20240100018A1Compounds for the treatment of a disease or disorder, methods for identifying said compounds
Publication Date: 2024.03.28 CEDARS SINAI MEDICAL CENT
  • US20240100018A1 patent drawing
  • US20240100018A1 patent drawing
  • US20240100018A1 patent drawing

AI summary

Disclosed herein are methods of identifying a compound for treating or preventing an infection with an infectious microbe, such as a coronavirus, in a subject in need thereof. Also disclosed herein are compounds and compositions identified by said methods, and methods of use thereof.