HPLC Separation of Empty and Full AAV Capsids

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Solution Overview

Problem

Current methods for determining the percent fraction of empty viral particles in AAV vector preparations are laborious, cumbersome, and low throughput, lacking effective separation and purification techniques to achieve high-quality standards for clinical use.

Innovation Solution

A method involving high-performance liquid chromatography (HPLC) with anion or cation exchange columns, using a discontinuous elution gradient and isocratic holds, to baseline separate and quantify empty and full AAV capsids, achieving high resolution and purity.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Manufacturing precision

If conventional chromatographic methods are used to separate empty and full AAV particles, then purification is attempted, but baseline peak resolution between empty particles and full vectors is not achieved

Engineering Contradiction:
Improveseparation resolutionVSAvoidmethod throughput
Core Design Contradiction:
Manufacturing precisionVSProductivity

Solution Approach 1:

The patent applies parameter changes by optimizing mobile phase composition (using specific buffers like Tris-HCl with NaCl gradients), adjusting pH levels (pH 7.0-9.0), modifying flow rates, and selecting specific column types (anion exchange or cation exchange) to achieve baseline separation between empty and full AAV particles while maintaining reasonable throughput

Inventive Principle:
Principle #35Parameter changes

2Measurement precision

If laborious and cumbersome methods are used to determine empty viral particle fraction, then measurement accuracy may be improved, but analysis time and operational complexity increase

Engineering Contradiction:
Improveempty particle quantification accuracyVSAvoidanalysis time
Core Design Contradiction:
Measurement precisionVSLoss of time

Solution Approach 1:

The patent replaces laborious manual separation and quantification procedures with an automated HPLC system that uses programmed mobile phase gradients and automated detection, thereby achieving accurate quantification of empty viral particles while significantly reducing analysis time and operational complexity

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

3Quantity of substance

If excess empty capsids are present in AAV vector preparations, then production yield is maintained, but immune response risk increases

Engineering Contradiction:
Improvevector production yieldVSAvoidimmune response risk
Core Design Contradiction:
Quantity of substanceVSObject-affected harmful factors

Solution Approach 1:

The patent extracts and separates empty capsids from full AAV vectors using chromatographic methods, removing the harmful empty particles while retaining the therapeutic full vectors, thereby reducing immune response risk while maintaining production yield of functional vectors

Inventive Principle:
Principle #2Taking out (Extraction)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach enables accurate separation and quantification of empty and full AAV capsids, improving the quality of AAV vector preparations by reducing immune response risks and enhancing manufacturing efficiency.

Implementation Method 1

The method comprises running the viral preparation and a mobile phase through an ion (e.g., anion or cation) exchange column

Methodology Applied
Scientific EffectIon Exchange: Ion Exchange

Data Source

PatentUS11725192B2Separation and quantification of empty and full viral capsid particles
Publication Date: 2023.08.15 SANGAMO THERAPEUTICS INC
  • US11725192B2 patent drawing
  • US11725192B2 patent drawing
  • US11725192B2 patent drawing

AI summary

The present disclosure provides methods for the separation and quantification of empty and full viral capsids (e.g., AAV capsids) within a viral preparation, such as a viral pharmaceutical composition or drug product.