Indirect Homogeneous Mobility Shift Assay for Biologic Detection

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Solution Overview

Problem

Current diagnostic tests lack accuracy for measuring the levels of biologics such as vedolizumab and ustekinumab in patients, which hinders effective treatment management for inflammatory bowel diseases like Crohn's disease and ulcerative colitis, as existing methods fail to precisely monitor drug efficacy and toxicity.

Innovation Solution

The development of novel indirect homogeneous mobility shift assays using size exclusion chromatography to detect and quantify biologics by forming complexes with unlabeled and labeled antigens, allowing for precise measurement of biologic levels in patient samples.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If existing diagnostic tests are used to measure biologic levels, then the testing process can be performed, but the measurement accuracy is insufficient for effective treatment management

Engineering Contradiction:
Improvebiologic level measurement accuracyVSAvoidtreatment management effectiveness
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The patent employs an intermediary antigen that binds to the biologic antibody, allowing indirect detection through a measurable complex formation. This intermediary approach enables accurate quantification of biologic levels in patient samples by measuring the antigen-antibody complex rather than the biologic directly, thereby resolving the contradiction between performability and measurement accuracy.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent replaces traditional mechanical or direct detection methods with a biochemical complex formation system. By substituting direct biologic detection with an indirect assay based on antigen-antibody complex formation and size exclusion chromatography, the system achieves superior measurement precision while maintaining treatment management reliability.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

2Ease of manufacture

If direct detection methods are used for biologics, then the assay can be performed, but the complexity increases due to the need to handle complex antigens

Engineering Contradiction:
Improveassay development simplicityVSAvoidantigen handling complexity
Core Design Contradiction:
Ease of manufactureVSDevice complexity

Solution Approach 1:

The patent uses a soluble antigen as an intermediary that simplifies the detection process. Instead of directly handling complex membrane-bound antigens, the assay employs a soluble form that can be easily incorporated into the assay system, thereby reducing device and protocol complexity while maintaining ease of manufacture.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent changes the physical state and solubility parameters of the antigen from membrane-bound to soluble form. This parameter change enables the antigen to be easily handled in solution-based assays, significantly simplifying assay development and manufacturing while reducing the complexity of antigen handling requirements.

Inventive Principle:
Principle #35Parameter changes

3Measurement precision

If conventional assay methods are used, then the testing can be completed, but the sensitivity is insufficient for monitoring drug efficacy and toxicity

Engineering Contradiction:
Improvedrug efficacy and toxicity monitoring sensitivityVSAvoidtreatment optimization speed
Core Design Contradiction:
Measurement precisionVSProductivity

Solution Approach 1:

The patent employs an intermediary antigen-antibody complex formation system that enhances detection sensitivity. By measuring the complex formation rather than the biologic directly, the assay achieves the sensitivity required for monitoring drug efficacy and toxicity, thereby improving treatment optimization speed without compromising productivity.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent substitutes conventional detection mechanisms with a biochemical complex-based detection system. This substitution enables sensitive monitoring of low concentrations of biologic drugs, improving measurement precision for efficacy and toxicity assessment while maintaining efficient treatment optimization workflows.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

These assays provide accurate and sensitive measurements of biologic levels, enabling improved therapeutic management, reduced toxicity, and optimized treatment decisions for patients receiving biologic therapy.

Implementation Method 1

subjecting the unlabeled and labeled complexes to size exclusion chromatography to separate the unlabeled and labeled complexes from free labeled biologic

Methodology Applied
Scientific EffectSize exclusion chromatography: Chromatography

Implementation Method 2

contacting the sample with an unlabeled soluble antigen that binds to the biologic to form an unlabeled complex between the antigen and the biologic

Methodology Applied
Scientific EffectAntigen-antibody binding: Chemical Bonding

Implementation Method 3

contacting the sample from step (a) with a labeled form of the biologic to form a labeled complex between the antigen and the labeled biologic

Methodology Applied
Scientific EffectAntigen-antibody binding: Chemical Bonding

Data Source

PatentUS20240183867A1Indirect homogeneous mobility shift assays for the detection of biologics in patient samples
Publication Date: 2024.06.06 PROMETHEUS LABORATORIES INC
  • US20240183867A1 patent drawing
  • US20240183867A1 patent drawing
  • US20240183867A1 patent drawing

AI summary

The present invention provides a sensitive and specific indirect homogeneous mobility shift assay using size exclusion chromatography to measure biologics such as vedolizumab and ustekinumab in a patient sample. The assays of the present invention are particularly advantageous for detecting the presence or level of biologics that target complex or large antigens including cell surface proteins, transmembrane proteins, heavily glycosylated proteins, and multimeric proteins, as well as antigens that cannot be purified, impure antigens, and partially or substantially purified antigens. The present invention also provides isolated soluble α4β7 integrin heterodimers and isolated soluble IL-12p40 monomers that are suitable for use in the indirect assays described herein.