Inducible Expression System for Streptococcus thermophilus

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Solution Overview

Problem

There is a lack of effective systems for controlled protein expression in Streptococcus thermophilus, which hinders the production of therapeutic proteins and other molecules, as existing systems are not adequately controlled and suffer from yield losses and surface proteolysis.

Innovation Solution

A new inducible expression system based on the quorum sensing cellular communication mechanism involving a small hydrophobic peptide (SHP) and a regulator protein (Rgg), allowing for self-induction or external induction of protein expression, thereby controlling protein production and minimizing yield losses.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If the NisRK regulatory gene expression system is used in L. lactis, then protein expression can be induced, but the promoter remains active at a significant level in the absence of the inducer, leading to leaky expression

Engineering Contradiction:
Improvecontrol precisionVSAvoidprotein yield
Core Design Contradiction:
ReliabilityVSLoss of substance

Solution Approach 1:

The invention extracts and eliminates the leaky expression problem by using a different regulatory system (SHP-Rgg quorum sensing) that does not suffer from the same defect as the NisRK system, thereby removing the harmful background expression while preserving the inducible expression capability

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The invention changes the regulatory parameter from the NisRK two-component system to the SHP-Rgg quorum sensing system, which fundamentally alters the expression control mechanism to eliminate leaky expression while maintaining inducible expression capability

Inventive Principle:
Principle #35Parameter changes

2Productivity

If existing expression systems are used in S. thermophilus, then protein production is possible, but the systems are not adequately controlled and suffer from yield losses and surface proteolysis

Engineering Contradiction:
Improveprotein productionVSAvoidyield loss
Core Design Contradiction:
ProductivityVSLoss of substance

Solution Approach 1:

The invention performs preliminary action by controlling protein expression timing through quorum sensing mechanisms, ensuring that protein production occurs only when bacteria reach appropriate cell density, thereby preventing premature expression that would lead to yield losses and surface proteolysis

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The invention implements feedback control through the quorum sensing system where the SHP peptide and Rgg regulator monitor bacterial cell density and automatically regulate promoter activity, creating a self-regulating system that optimizes protein production while minimizing losses

Inventive Principle:
Principle #23Feedback

3Reliability

If a quorum sensing system with SHP peptide and Rgg regulator is used, then precise control of protein expression is achieved, but the system complexity increases

Engineering Contradiction:
Improveexpression controlVSAvoidsystem complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The invention applies self-service by utilizing the bacterium's own native quorum sensing components (SHP peptide and Rgg regulator) that already exist in S. thermophilus, thereby achieving precise expression control without introducing complex external regulatory systems

Inventive Principle:
Principle #25Self-service

Solution Approach 2:

The invention leverages the universal quorum sensing mechanism that naturally regulates bacterial group behavior for multiple functions, including both native bacterial coordination and heterologous protein expression control, thereby simplifying the overall system architecture

Inventive Principle:
Principle #6Universality (Multi-functionality)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The system enables precise and controlled expression of proteins, reducing leaky expression and surface proteolysis, and allows for the production of therapeutic proteins like elafin with enhanced yield and stability.

Implementation Method 1

a promoter positively regulated by a protein complex formed by a small hydrophobic peptide called "SHP" and a regulator protein called "Rgg"

Methodology Applied
Scientific EffectQuorum sensing:

Implementation Method 2

They also showed that an Ami oligopeptide transporter allows the import of the mature SHP. Finally, they demonstrated an interaction between the mature SHP peptide and a transcriptional regulator of the Rgg family

Methodology Applied
Scientific EffectPeptide-protein interaction:

Data Source

PatentUS20240392305A1Genetically modified bacteria and uses thereof for the inducible expression of a nucleic sequence of interest
Publication Date: 2024.11.28 INST NAT DE RECH POUR LAGRICULTURE
  • US20240392305A1 patent drawing
  • US20240392305A1 patent drawing
  • US20240392305A1 patent drawing

AI summary

The present invention relates to genetically modified bacteria capable of inducibly expressing a nucleic acid sequence of interest, genetic constructs, vectors and uses thereof.