Insect Gene Expression via Alternative Splicing Control

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Solution Overview

Problem

Current methods for expressing functional proteins in insects lack efficient mechanisms for sex-specific and stage-specific regulation, particularly in developmental processes, and are associated with defects linked to human disorders.

Innovation Solution

A gene expression system utilizing sex-specific alternative splicing with splice control sequences, including a protein binding domain with a specific DNA consensus sequence, to regulate the expression of functional proteins in insects, allowing for sex-specific and stage-specific mediation of protein expression.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Adaptability or versatility

If conventional gene expression systems are used in insects, then protein expression can be achieved, but sex-specific and stage-specific regulation is lacking

Engineering Contradiction:
Improvesex-specific and stage-specific regulation capabilityVSAvoidgene expression system structure
Core Design Contradiction:
Adaptability or versatilityVSDevice complexity

Solution Approach 1:

The gene expression system is segmented into distinct functional modules: a promoter region, a coding sequence, and multiple intronic splice control sequences (ISSCS). Each ISSCS contains specific splice site sequences (5'-GT...AG-3') and regulatory elements that can independently function to control splicing. This modular segmentation enables flexible combination of different regulatory elements to achieve sex-specific and stage-specific expression patterns.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

Intronic splice control sequences act as intermediary elements between the promoter and the coding sequence. These ISSCS sequences mediate the regulation of gene expression by controlling alternative splicing events, thereby determining whether the coding sequence is included or excluded from the final mRNA transcript based on sex and developmental stage.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Reliability

If alternative splicing is used for regulation, then protein expression can be controlled, but defects linked to human disorders may occur

Engineering Contradiction:
Improvegene expression control accuracyVSAvoidsplicing defects
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The system utilizes controlled changes in splicing parameters through the introduction of specific intronic splice control sequences. By modifying the splicing parameters (presence/absence of ISSCS, splice site sequences, and regulatory elements), the system achieves reliable sex-specific and stage-specific expression while maintaining proper splicing fidelity to prevent defects.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The splice control sequences are designed to self-regulate splicing decisions based on the cellular environment. The ISSCS elements contain intrinsic sequences (5'-GT...AG-3') that automatically interact with the splicing machinery to ensure accurate splicing outcomes without requiring external correction mechanisms, thereby preventing splicing defects.

Inventive Principle:
Principle #25Self-service

3Productivity

If existing sterilization techniques like SIT are used, then population control can be achieved, but environmental and operational drawbacks exist

Engineering Contradiction:
Improvepopulation control efficiencyVSAvoidtechnique implementation complexity
Core Design Contradiction:
ProductivityVSEase of operation

Solution Approach 1:

The patent replaces mechanical/physical sterilization methods (such as irradiation used in SIT) with a molecular/biological control mechanism. Instead of using physical agents to sterilize insects, the system uses genetically engineered alternative splicing to produce functional or non-functional proteins that control reproduction, thereby simplifying operational procedures and reducing environmental impact.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

Enables precise regulation of protein expression, achieving functional protein production with lethal or therapeutic effects, such as sterilization, without the drawbacks of existing techniques like the Sterile Insect Technique, by using a system that can be controlled environmentally or through specific conditions.

Implementation Method 1

Spliceosomes are large complexes of small nuclear RNA and protein particles (snRNPs) which assemble with pre-mRNA to achieve RNA splicing, by removing introns from eukaryotic nuclear RNAs

Methodology Applied
Scientific EffectSplicing:

Implementation Method 2

Alternative splicing involves the removal of one or more introns and ligation of the flanking exons. This reaction is catalyzed by the spliceosome

Methodology Applied
Scientific EffectAlternative splicing:

Data Source

PatentEP1984512B1Gene expression system using alternative splicing in insects
Publication Date: 2016.12.07 OXITEC LTD
  • EP1984512B1 patent drawingFigure 1~2
  • EP1984512B1 patent drawingFigure 3~4
  • EP1984512B1 patent drawingFigure 5

AI summary

A polynucleotide expression system is provided that is capable of alternative splicing of RNA transcripts of a polynucleotide sequence to be expressed in an organism.