Interleaved Vacuum Extraction in Multi-Plate Chemical Synthesis

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Solution Overview

Problem

Chemical synthesizer systems with multiple synthesis plates face significant processing time challenges due to the sequential execution of vacuum and delivery instructions, resulting in prolonged processing times when handling two plates, which can take almost twice as long as processing a single plate.

Innovation Solution

Interleaving vacuum instructions with delivery instructions, allowing the vacuum assembly to draw reagents from one plate while the delivery assembly delivers reagents to another plate, thereby parallel processing and reducing overall processing time.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Device complexity

If vacuum instructions and delivery instructions are executed sequentially, then the controller can process instructions in a simple linear manner, but the processing time for multiple synthesis plates increases significantly

Engineering Contradiction:
Improvecontroller instruction processing complexityVSAvoidprocessing time for multiple synthesis plates
Core Design Contradiction:
Device complexityVSLoss of time

Solution Approach 1:

The instruction queue is segmented into separate vacuum instruction queue and delivery instruction queue. This segmentation allows independent processing of vacuum and delivery operations, enabling parallel execution and reducing overall processing time for multiple synthesis plates.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The system transitions from sequential single-dimensional instruction processing to parallel multi-dimensional processing by creating separate queues for vacuum and delivery instructions. This dimensional change in instruction processing architecture enables simultaneous execution of multiple operations.

Inventive Principle:
Principle #17Another dimension (Dimensionality change)

2Productivity

If the controller executes up to two commands per time slice, then processing efficiency is improved, but the total processing time for 800,000 instructions across two plates still doubles to approximately 15 hours

Engineering Contradiction:
Improveprocessing efficiencyVSAvoidtotal processing time for two synthesis plates
Core Design Contradiction:
ProductivityVSLoss of time

Solution Approach 1:

The separate vacuum and delivery instruction queues enable continuous useful action by eliminating idle waiting time. While one operation (vacuum or delivery) is executing, the other can be prepared or executed in parallel, ensuring that equipment and controllers are continuously productive without sequential bottlenecks.

Inventive Principle:
Principle #20Continuity of useful action

Solution Approach 2:

Instructions are pre-processed and organized into separate vacuum and delivery queues before execution. This preliminary organization allows the controller to efficiently manage and execute instructions in parallel, reducing overall processing time by avoiding sequential bottlenecks during runtime.

Inventive Principle:
Principle #10Preliminary action

3Loss of time

If vacuum instructions are moved to a separate queue for parallel execution, then processing time is reduced, but the device complexity increases due to multiple instruction queues

Engineering Contradiction:
Improveprocessing time for synthesis platesVSAvoidinstruction queue structure
Core Design Contradiction:
Loss of timeVSDevice complexity

Solution Approach 1:

The controller is designed with universal multi-functionality to manage multiple instruction queues (vacuum queue and delivery queue) simultaneously. This multi-functional capability allows the same controller hardware to handle complex parallel instruction processing without requiring additional dedicated controllers for each function.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach effectively reduces the processing time for two synthesis plates to approximately the same time required for processing a single plate, doubling the processing rate and significantly improving efficiency.

Implementation Method 1

the vacuum assembly draws the reagent delivered by the delivery assembly through the plurality of wells included in each of the plurality of synthesis plates

Methodology Applied
Scientific EffectVacuum: Vacuum

Data Source

PatentUS12057200B1Synthesizer system with interleaving vacuum extraction
Publication Date: 2024.08.06 INTEGRATED DNA TECHNOLOGIES INC
  • US12057200B1 patent drawing
  • US12057200B1 patent drawing
  • US12057200B1 patent drawing

AI summary

Chemical synthesizer systems and methods for operating the same. One method includes receiving a first queue of instructions including a plurality of delivery instructions for operating a delivery assembly with respect to a plurality of synthesis plates and a plurality of vacuum instructions, grouped in a plurality of vacuum sections, for operating a vacuum assembly with respect to the plurality of synthesis plates. The method also includes sequentially processing each instruction included in the first queue of instructions by (i) executing the instruction when the instruction is one of the plurality of delivery instructions and (ii) moving, when the instruction is one of the plurality of vacuum instructions, one of the plurality of vacuum sections including the instruction to a second queue of instructions and executing instructions included in the second queue of instruction in parallel with instructions included in the first queue of instructions.