Liver-Specific DNase Expression for cfDNA Clearance

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Solution Overview

Problem

Current methods for reducing circulating cell-free DNA (cfDNA) levels in the blood, particularly in patients with cancer and neurodegenerative diseases, show limited efficacy, necessitating more efficient approaches for effective treatment.

Innovation Solution

The development of a recombinant adeno-associated virus (rAAV) expression vector with a liver-specific promoter and capsid protein mutations for targeted delivery and expression of DNase enzymes in the liver, ensuring high and specific expression of DNase activity in liver tissues to effectively clear cfDNA from the hepatic porto-sinusoidal circulation.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If systemic administration of high doses of DNase protein is used to reduce circulating cfDNA levels, then cfDNA clearance is improved, but treatment efficacy is limited due to poor clearance from hepatic porto-sinusoidal circulation

Engineering Contradiction:
ImprovecfDNA clearance efficiencyVSAvoidtreatment efficacy
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent uses a viral vector (AAV or adenovirus) as an intermediary delivery system to transport DNase gene into liver cells. This mediator enables targeted gene delivery to hepatocytes, allowing the DNase enzyme to be produced locally within the liver where cfDNA accumulates, thereby overcoming the limitation of systemic DNase administration that cannot effectively clear cfDNA from hepatic porto-sinusoidal circulation.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The liver cells are transformed into self-service factories that continuously produce and secrete DNase enzyme. By introducing the DNase gene into hepatocytes via viral vectors, the liver cells themselves generate the therapeutic enzyme locally, maintaining sustained high concentrations of DNase in the hepatic porto-sinusoidal circulation where it is most needed for cfDNA clearance, rather than relying on intermittent systemic administration.

Inventive Principle:
Principle #25Self-service

2Productivity

If liver-specific delivery and expression of DNase is implemented, then cfDNA clearance from hepatic porto-sinusoidal circulation is significantly improved, but device complexity increases due to use of viral vectors and genetic engineering

Engineering Contradiction:
ImprovecfDNA clearance efficiencyVSAvoiddelivery system complexity
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent applies local quality by making the DNase expression liver-specific rather than systemic. Through using liver-targeted viral vectors and liver-specific promoters, the DNase gene is selectively expressed in hepatocytes, creating high local concentration of the enzyme precisely where cfDNA accumulates in the hepatic porto-sinusoidal circulation, maximizing therapeutic effect while minimizing off-target effects.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent utilizes parameter changes by modifying viral vector properties to achieve liver-specific targeting. Specific capsid proteins or mutations are employed to alter the tropism of viral vectors, directing them preferentially to liver cells. Additionally, liver-specific promoters regulate the expression level of DNase, creating optimal local concentration parameters in the liver while maintaining safety in other tissues.

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach leads to significant clearance of cfDNA from the liver and systemic circulation, demonstrating antitumor effects, reducing chemotherapy toxicity, and slowing disease progression in conditions characterized by elevated cfDNA levels, including cancer and neurodegenerative diseases.

Implementation Method 1

liver expression of an enzyme which has a deoxyribonuclease (DNase) activity for enhanced clearance of cell free DNA (cfDNA)

Methodology Applied
Scientific EffectDeoxyribonuclease (DNase) activity: Enzyme

Data Source

PatentUS11905522B2Treatment of diseases by liver expression of an enzyme which has a deoxyribonuclease (DNase) activity
Publication Date: 2024.02.20 CLS THERAPEUTICS
  • US11905522B2 patent drawing
  • US11905522B2 patent drawing
  • US11905522B2 patent drawing

AI summary

The invention relates to the liver-specific delivery and/or expression of an enzyme which has a deoxyribonuclease (DNase) activity for enhanced clearance of cell free DNA (cfDNA) accumulated in hepatic porto-sinusoidal circulation and the use of such liver-specific delivery and/or expression for treatment of various diseases and conditions, including cancer and neurodegeneration.