Macrocyclic Compounds for Selective Glucose Detection

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Solution Overview

Problem

Current synthetic saccharide receptor molecules face challenges in selectively binding to target saccharides in aqueous media due to the hydrophilic nature of saccharides, which makes it difficult to distinguish between saccharide molecules with subtle structural differences, and existing technologies lack high affinity and selectivity for glucose detection.

Innovation Solution

Development of novel macrocyclic compounds that form strong hydrogen bonds and hydrophobic interactions with target saccharides, such as glucose, allowing for selective binding and detection in aqueous environments.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If synthetic saccharide receptor molecules are used to detect glucose in aqueous media, then saccharide detection capability is provided, but binding affinity and selectivity are insufficient due to the hydrophilic nature of saccharides

Engineering Contradiction:
Improveglucose detection selectivityVSAvoidbinding affinity
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The macrocyclic receptor is segmented into distinct functional regions: hydrophobic pockets for accommodating the saccharide core, hydrogen-bonding sites for specific hydroxyl group interactions, and hydrophilic exterior regions for aqueous solubility. This segmentation allows simultaneous optimization of binding affinity (through hydrophobic and H-bonding interactions) and selectivity (through geometric complementarity of the segmented binding sites).

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

Different regions of the macrocyclic receptor exhibit different local properties: the interior binding pocket is hydrophobic to exclude water and enhance saccharide binding, while the exterior surface is hydrophilic to ensure aqueous solubility. Specific nitrogen atoms are positioned to create localized hydrogen-bonding sites that match the hydroxyl group pattern of glucose, providing both affinity and selectivity.

Inventive Principle:
Principle #3Local quality

2Measurement precision

If receptor molecules are designed to bind saccharides in aqueous media, then saccharide detection is enabled, but water molecules interfere with binding due to their high abundance and similarity to saccharide hydroxyl groups

Engineering Contradiction:
Improvesaccharide recognition accuracyVSAvoidwater interference
Core Design Contradiction:
Measurement precisionVSObject-affected harmful factors

Solution Approach 1:

The high abundance of water molecules, which normally interferes with binding, is converted into a benefit by designing the macrocyclic receptor with a hydrophobic interior pocket. This hydrophobic environment actively excludes water molecules through the hydrophobic effect, creating a favorable binding environment that enhances both affinity and selectivity for the saccharide target.

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

Solution Approach 2:

The macrocyclic receptor employs asymmetric chiral centers and non-symmetric hydrogen-bonding site arrangements that create a unique three-dimensional binding pocket. This asymmetric structure provides geometric complementarity to the specific configuration of glucose hydroxyl groups, enabling the receptor to distinguish glucose from water molecules and other saccharides despite their similar functional groups.

Inventive Principle:
Principle #4Asymmetry

3Productivity

If existing synthetic lectins are used for saccharide detection, then basic detection functionality is achieved, but affinity and selectivity fall short of natural lectin performance

Engineering Contradiction:
Improvedetection functionalityVSAvoidbinding selectivity
Core Design Contradiction:
ProductivityVSMeasurement precision

Solution Approach 1:

The macrocyclic receptor combines multiple interaction modalities into a single composite molecular structure: hydrophobic interactions through aromatic rings, hydrogen bonding through positioned nitrogen atoms, and steric complementarity through the macrocyclic framework. This composite design integrates the advantages of different binding mechanisms to achieve both the functionality and the high affinity/selectivity characteristic of natural lectins.

Inventive Principle:
Principle #40Composite materials

Solution Approach 2:

The invention optimizes key molecular parameters including the macrocycle ring size, the number and position of hydrogen-bonding nitrogen atoms, the hydrophobic surface area of the binding pocket, and the overall three-dimensional geometry. By systematically tuning these parameters, the receptor achieves binding affinity and selectivity values that match or exceed natural lectins while maintaining synthetic accessibility.

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The compounds demonstrate high affinity and selectivity towards glucose, enabling effective saccharide detection in various media, including biological and fermentation environments, with water solubility suitable for compatibility in these settings.

Implementation Method 1

The compounds of the present invention are capable of selectively binding to a target saccharide (e.g. glucose)... form strong hydrogen bonds and hydrophobic interactions with target saccharides

Methodology Applied
Scientific EffectHydrogen bonding:

Implementation Method 2

form strong hydrogen bonds and hydrophobic interactions with target saccharides, such as glucose, allowing for selective binding and detection in aqueous environments

Methodology Applied
Scientific EffectHydrophobic interaction: Hydrophobe

Data Source

PatentUS20230365514A1Macrocyclic compounds
Publication Date: 2023.11.16 NOVO NORDISK RES CENT OXFORD LTD
  • US20230365514A1 patent drawing
  • US20230365514A1 patent drawing
  • US20230365514A1 patent drawing

AI summary

The present invention relates to macrocyclic compounds which are capable of selective binding to a target saccharide (e.g. glucose), making them particularly well suited for use in saccharide sensing applications. The present invention also relates to processes for the preparation of said compounds, to compositions and devices comprising them, and to their use in the detection of a target saccharide.