Macrocyclic Compounds Targeting KRAS and HIF-1α Pathways

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Solution Overview

Problem

Current cancer therapies targeting microtubules often have limited selectivity and efficacy, particularly in addressing oncogenic KRAS and HIF-1α pathways, necessitating the development of novel microtubule-targeting agents with improved specificity and antiproliferative effects.

Innovation Solution

The identification and development of macrocyclic compounds, such as Gatorbulin-1 (GB1) and Gatorbulin-2 (GB2), which act as microtubule-destabilizing cyclodepsipeptides, preferentially targeting cancer cells over normal cells and inhibiting HIF-1α and KRAS pathways, thereby modulating proliferation activity.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional microtubule-targeting agents are used, then antiproliferative effects are achieved, but selectivity against cancer cells with specific oncogenic pathways (KRAS, HIF-1α) is insufficient

Engineering Contradiction:
ImproveselectivityVSAvoidpathway-specific targeting
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent applies local quality by designing macrocyclic compounds with specific structural features (hydroxyl group configurations, ring sizes, stereochemistry) that enable selective binding to microtubules in cancer cells with specific oncogenic pathways. The compounds have differentiated local chemical properties (e.g., specific R group configurations in Formula I) that confer preferential activity against KRAS- and HIF-1α-containing cells while sparing normal cells.

Inventive Principle:
Principle #3Local quality

2Productivity

If current cancer therapies are used, then general antiproliferative activity is achieved, but efficacy against specific oncogenic pathways (KRAS, HIF-1α) is limited

Engineering Contradiction:
Improveantiproliferative activityVSAvoidpathway-specific efficacy
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent employs parameter changes by systematically varying molecular parameters of the macrocyclic compounds including ring size, substituent types (R groups), stereochemistry, and functional group positions. These parameter modifications result in compounds with enhanced and differentiated antiproliferative activity profiles, showing preferential potency against cancer cell lines with specific oncogenic pathways while maintaining general microtubule-targeting mechanisms.

Inventive Principle:
Principle #35Parameter changes

Data Source

PatentUS20240002396A1Macrocyclic compounds and methods of treatment
Publication Date: 2024.01.04 SMITHSONIAN INSTITUTION
  • US20240002396A1 patent drawing
  • US20240002396A1 patent drawing
  • US20240002396A1 patent drawing

AI summary

The instant invention describes macrocyclic compounds having antiproliferation activity, and methods of treating disorders such as cancer, tumors and cell proliferation related disorders.