Mass Cytometry Sample Carriers for Quantifying Soluble Analytes

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Solution Overview

Problem

Existing mass spectrometry techniques are limited in their ability to detect and quantify analytes in solution, particularly proteins, nucleic acids, and carbohydrates, as they require labeling with element-tagged reagents and are primarily focused on cellular samples.

Innovation Solution

Development of mass cytometry sample carriers with surface modifications, such as non-fouling layers and capacity-enhancing polymer brushes, to immobilize soluble analytes, enabling precise quantitation through mass cytometry by binding analytes to capture elements on a solid phase.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Difficulty of detecting and measuring

If mass spectrometry is applied to detect analytes in solution, then detection capability is improved, but quantitation precision deteriorates due to lack of immobilization

Engineering Contradiction:
Improvedetection capabilityVSAvoidquantitation precision
Core Design Contradiction:
Difficulty of detecting and measuringVSMeasurement precision

Solution Approach 1:

The patent applies preliminary action by immobilizing analytes to a solid support surface before mass spectrometry analysis. This pre-immobilization step ensures that analytes are properly positioned and concentrated on the analysis surface, enabling both detection and precise quantitation. The solid support serves as a platform that captures and holds analytes in a controlled manner prior to measurement.

Inventive Principle:
Principle #10Preliminary action

2Measurement precision

If soluble analytes are immobilized to solid phase, then quantitation precision is improved, but non-specific adsorption increases

Engineering Contradiction:
Improvequantitation precisionVSAvoidnon-specific adsorption
Core Design Contradiction:
Measurement precisionVSObject-generated harmful factors

Solution Approach 1:

The patent applies local quality by creating functionally distinct regions on the solid support surface. Specific binding regions are engineered with properties that promote selective analyte capture, while non-specific regions are designed to minimize unwanted adsorption. This spatial differentiation of surface properties allows the system to achieve high quantitation precision while reducing background noise from non-specific binding events.

Inventive Principle:
Principle #3Local quality

3Adaptability or versatility

If element-tagged reagents are used for labeling, then multiparametric analysis capability is improved, but complexity of sample preparation increases

Engineering Contradiction:
Improvemultiparametric analysis capabilityVSAvoidcomplexity of sample preparation
Core Design Contradiction:
Adaptability or versatilityVSDevice complexity

Solution Approach 1:

The patent applies universality by developing a solid support system that can accommodate multiple types of analytes and detection methods through a single platform. The solid support is designed with universal binding characteristics that work across different analyte classes, eliminating the need for separate preparation protocols for each analyte type. This multi-functional approach enables multiparametric analysis while simplifying the overall sample preparation workflow.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

Enables quantitative detection and multiplexed analysis of analytes in solution, providing a linear response curve and improved sensitivity and specificity, allowing for the analysis of proteins and DNA with increased signal-to-noise ratio and reduced non-specific adsorption.

Implementation Method 1

soluble analytes from solution (e.g. proteins, nucleic acids, carbohydrates in solution which are immobilised to the solid phase by being bound by an immobilised reagent)

Methodology Applied
Scientific EffectAdsorption: Adsorption

Implementation Method 2

performing mass cytometry on the sample to determine the level of the one or more labelling atoms, wherein the level of the one or more labelling atoms corresponds to the copy number of the one or more analytes

Methodology Applied
Scientific EffectMass spectrometry:

Data Source

PatentUS20250283890A1Reagents and methods for elemental mass spectrometry of biological samples
Publication Date: 2025.09.11 STANDARD BIOTOOLS CANADA INC
  • US20250283890A1 patent drawing
  • US20250283890A1 patent drawing
  • US20250283890A1 patent drawing

AI summary

Embodiments of the present invention relate to reagents and their use for elemental imaging mass spectrometry of biological samples. Embodiments include a method for quantifying one or more analytes within a sample. The method may include providing the sample. One or more analytes may be immobilised to a mass cytometry sample carrier. The sample may have been labelled with one or more mass-tagged SB Ps including one or more labelling atoms. The method may include performing mass cytometry on the sample to determine a level of the one or more labelling atoms, where the level of the one or more labelling atoms corresponds to the copy number of the one or more analytes to quantify the analytes.