Membrane-less Microfluidic Incubation for Molecular Microarrays

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Solution Overview

Problem

Current methods for generating molecular microarrays, such as protein, DNA, and RNA microarrays, face challenges including cumbersome and costly processes, poor reproducibility, mechanical stress, and the need for membrane-mediated reactions that limit resolution and reproducibility.

Innovation Solution

A device and method utilizing a microfluidic incubation chamber without a membrane layer between template and capture surfaces, allowing decoupling of assembly and reaction initiation, enabling controlled and reproducible transfer of molecules via a cell-free enzymatic and/or chemical reaction system.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If a membrane layer is used between template and capture surfaces, then the reaction can be mediated and controlled, but the resolution and reproducibility are limited and mechanical stress is increased

Engineering Contradiction:
ImprovereproducibilityVSAvoidresolution
Core Design Contradiction:
ReliabilityVSManufacturing precision

Solution Approach 1:

The patent removes the membrane layer from the system entirely. Instead of using a membrane to mediate the reaction between template and capture surfaces, the invention allows direct interaction through a membrane-less interface, thereby eliminating the sources of resolution limitation and mechanical stress that the membrane introduced

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent eliminates the need for an intermediary membrane layer. The reaction between template and capture surfaces proceeds directly without membrane mediation, which had been causing reproducibility issues and limiting resolution. The fluid phase serves as the intermediary medium rather than a physical barrier

Inventive Principle:
Principle #24Intermediary (Mediator)

2Device complexity

If assembly and reaction initiation are coupled, then the process is simplified, but the reproducibility and control are reduced

Engineering Contradiction:
Improveprocess simplicityVSAvoidreproducibility
Core Design Contradiction:
Device complexityVSReliability

Solution Approach 1:

The patent separates the assembly process from the reaction initiation process into distinct temporal and spatial phases. Assembly of the microarray structure is completed first, then the reaction is initiated separately through fluid introduction, allowing independent optimization of both steps and improving reproducibility

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent performs preliminary assembly of the template and capture surfaces before initiating the reaction. The microarray structure is fully assembled and positioned, then the reaction is triggered by introducing the cell-free expression system through the microfluidic chamber, enabling precise control over when the reaction occurs

Inventive Principle:
Principle #10Preliminary action

3Productivity

If a membrane-mediated reaction system is used, then the reaction can be contained, but the speed and resolution of molecular transfer are reduced

Engineering Contradiction:
Improvespeed of productionVSAvoidresolution
Core Design Contradiction:
ProductivityVSManufacturing precision

Solution Approach 1:

The patent removes the membrane layer that was slowing down and blurring the molecular transfer process. By eliminating this intermediate barrier, the direct interaction between template and capture surfaces enables faster, sharper, and more resolved molecular transfer

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent uses a microfluidic system with controlled fluid flow to enable precise and rapid molecular transfer. The fluid phase allows molecules to move quickly and accurately from the template to the capture surface without the diffusive limitations imposed by a membrane, achieving both high speed and high resolution

Inventive Principle:
Principle #29Pneumatics and hydraulics

4Ease of manufacture

If the template surface is used only once, then the process is simple, but the cost and resource utilization are increased

Engineering Contradiction:
Improveprocess simplicityVSAvoidresource utilization
Core Design Contradiction:
Ease of manufactureVSQuantity of substance

Solution Approach 1:

The patent enables the template surface to be reused multiple times by maintaining it in a stable, non-consumptive state. The template DNA remains intact and can be reused across multiple reaction cycles, continuously generating protein microarrays without degradation or depletion

Inventive Principle:
Principle #20Continuity of useful action

Solution Approach 2:

The patent recovers and reuses the template surface after each reaction cycle. Instead of discarding the template after single use, it is recovered, regenerated, and reused for subsequent protein microarray productions, significantly improving resource utilization and reducing costs

Inventive Principle:
Principle #34Discarding and recovering

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach significantly reduces costs, improves reproducibility, and enhances the resolution and speed of molecular microarray production, allowing multiple uses of a single template surface and minimizing mechanical stress, thus overcoming the limitations of existing technologies.

Implementation Method 1

production of an output molecule from a template molecule via enzymatic or chemical processes

Methodology Applied
Scientific EffectEnzymatic reaction: Enzyme

Implementation Method 2

transfer of the output molecule onto the desired molecular microarray

Methodology Applied
Scientific EffectFluid flow:

Data Source

PatentEP2670525B1Device and method for the generation of molecular microarrays
Publication Date: 2021.09.29 BIOCOPY GMBH
  • EP2670525B1 patent drawingFigure 1
  • EP2670525B1 patent drawingFigure 2
  • EP2670525B1 patent drawingFigure 3

AI summary

The invention relates to a device and a method for the generation of molecular microarrays. The invention relates therefore to a universal approach for the generation of protein microarrays, DNA microarrays and RNA microarrays (in general nucleic acid microarrays), by production of an output molecule from a template molecule microarray via enzymatic or chemical processes and transfer of the output molecule onto the desired molecular microarray.