Membrane Protein Synthesis in Lipid Disks via Dialysis

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Solution Overview

Problem

Current methods for producing membrane proteins using cell-free protein synthesis systems face challenges with yield and reproducibility, particularly in achieving active structures and integrating membrane proteins into lipid bilayers effectively.

Innovation Solution

A method involving a cell-free protein synthesis system where a steroidal detergent and phospholipids coexist, with the detergent concentration above its critical micelle concentration, allowing for simultaneous protein synthesis and lipid bilayer formation, enabling efficient integration of membrane proteins into lipid disks or liposomes through a dialysis process.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Stability of the object's composition

If a detergent is used in the cell-free protein synthesis system to maintain membrane protein solubility, then the membrane protein remains soluble during synthesis, but the detergent may inhibit protein synthesis or fail to stabilize the synthesized protein

Engineering Contradiction:
Improvemembrane protein solubilityVSAvoidprotein synthesis efficiency
Core Design Contradiction:
Stability of the object's compositionVSProductivity

Solution Approach 1:

The invention changes the concentration parameter of detergent during the synthesis process. Initially, detergent is present at a concentration above the critical micelle concentration (CMC) to maintain solubility. During dialysis, the detergent concentration is gradually decreased to below the CMC, which removes the inhibition on protein synthesis while maintaining protein solubility through the formed liposomes. This dynamic parameter change resolves the contradiction between solubility maintenance and synthesis efficiency.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If lipid liposome is added to the cell-free protein synthesis system to enable membrane protein integration, then membrane proteins can be synthesized with biological function, but the probability of contact between synthesized polypeptide chain and liposome is low

Engineering Contradiction:
Improvemembrane protein biological functionVSAvoidintegration efficiency
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The invention performs preliminary action by adding lipid and detergent to the reaction system before protein synthesis begins. The detergent above CMC ensures lipids are solubilized and form a homogeneous solution. During synthesis, as detergent concentration decreases via dialysis, lipids spontaneously assemble into liposomes that are already present in the reaction medium, increasing the probability of contact with synthesized polypeptide chains and enabling efficient integration.

Inventive Principle:
Principle #10Preliminary action

3Stability of the object's composition

If detergent concentration is maintained above critical micelle concentration during synthesis, then membrane protein remains soluble, but lipid bilayer formation is inhibited

Engineering Contradiction:
Improveprotein solubilityVSAvoidlipid bilayer structure
Core Design Contradiction:
Stability of the object's compositionVSShape

Solution Approach 1:

The invention employs periodic action through the dialysis process, which gradually changes the detergent concentration over time. In the initial period, high detergent concentration (above CMC) maintains protein solubility. As dialysis progresses, the concentration periodically decreases, allowing lipid bilayer formation when detergent drops below CMC. This time-dependent periodic change in concentration resolves the contradiction between maintaining solubility and enabling bilayer formation.

Inventive Principle:
Principle #19Periodic action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach promotes the synthesis of membrane proteins in their native or active form, inhibiting aggregation and allowing for universal application across various membrane proteins, enhancing yield and reproducibility while maintaining structural integrity.

Implementation Method 1

a steroidal detergent and a phospholipid, wherein the steroidal detergent is contained at a concentration higher than its critical micelle concentration

Methodology Applied
Scientific EffectCritical micelle concentration: Surfactant

Implementation Method 2

synthesizing the membrane protein while decreasing the concentration of said steroidal detergent in the reaction solution, simultaneously with the formation of a lipid disk or liposome

Methodology Applied
Scientific EffectDialysis: Semipermeable Membrane

Data Source

PatentEP2213747B1Method for producing membrane protein
Publication Date: 2021.06.30 RIKEN CO LTD
  • EP2213747B1 patent drawingFigure 1A~1B
  • EP2213747B1 patent drawingFigure 2A~2B
  • EP2213747B1 patent drawingFigure 3A~3B

AI summary

A method is provided for producing a membrane protein folded to its native structure or active structure in a lipid disc or a liposome. The method comprises the following steps: (a) preparing a reaction solution for cell-free protein synthesis containing a polynucleotide encoding a membrane protein, a steroidal detergent, and a phospholipid, wherein the steroidal detergent is contained at a concentration higher than its critical micelle concentration; (b) decreasing the concentration of said steroidal detergent in the reaction solution; and (c) synthesizing the membrane protein simultaneously with formation of a lipid disk or liposome into which the synthesized membrane protein is integrated.