Microbial Colony Differentiation via Multi-Illumination Imaging

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Solution Overview

Problem

Current automated systems for counting microbial colonies in culture devices face challenges in accurately distinguishing between different types of colonies, especially when indicator compounds produce similar color products, leading to errors in colony enumeration.

Innovation Solution

A method utilizing a biological scanning system that generates images of culture devices with varying illumination ratios to differentiate microbial colonies based on their reactions with multiple indicator compounds, applying image processing rules to accurately count and identify colony types.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If automated image processing is used to count microbial colonies, then productivity is improved, but measurement precision deteriorates due to inability to distinguish similar-colored colonies

Engineering Contradiction:
Improveautomated colony counting speedVSAvoidcolony type differentiation accuracy
Core Design Contradiction:
ProductivityVSMeasurement precision

Solution Approach 1:

The patent segments the colony identification process into multiple stages: initial automated detection of all colonies, followed by secondary analysis using multiple imaging modalities (transmitted light, reflected light, fluorescence) to differentiate colony types. This segmentation allows high-speed automated counting while maintaining precision through targeted additional imaging only when needed.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent introduces intermediary imaging techniques between the initial detection and final classification. Multiple indicator compounds with different optical properties act as intermediaries that reveal colony type information without interfering with the automated counting process. The system uses these intermediary signals to resolve ambiguities in colony differentiation.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Measurement precision

If multiple indicator compounds are used to differentiate colony types, then measurement precision is improved, but device complexity increases

Engineering Contradiction:
Improvecolony type identification accuracyVSAvoidimaging system configuration
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent employs a multi-functional imaging system where a single imaging device can operate in multiple modes (transmitted light imaging, reflected light imaging, fluorescence imaging) by changing illumination and detection configurations. This universality allows the system to extract multiple types of information from the same sample without requiring separate specialized devices for each imaging modality.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The imaging system is designed to be dynamic, allowing real-time switching between different imaging modes based on the specific differentiation needs. The system can adaptively select which imaging modality to use for each colony or group of colonies, optimizing the balance between precision and complexity for each specific measurement task.

Inventive Principle:
Principle #15Dynamics

3Device complexity

If traditional single-illumination imaging is used, then device complexity is reduced, but measurement precision deteriorates due to inability to distinguish colonies with similar color products

Engineering Contradiction:
Improveimaging system structureVSAvoidcolony differentiation capability
Core Design Contradiction:
Device complexityVSMeasurement precision

Solution Approach 1:

The patent transitions from single-illumination imaging to multi-dimensional imaging by incorporating multiple indicator compounds that respond to different illumination types (transmitted light, reflected light, fluorescence). This adds dimensional information about colony biochemical properties, enabling differentiation of colonies with similar appearances under conventional imaging while maintaining relatively simple device architecture.

Inventive Principle:
Principle #17Another dimension (Dimensionality change)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

Improves the accuracy of automated colony counting by effectively distinguishing between different microorganism types and sizes, even when products from indicator compounds appear similar in color, enhancing the reliability of microbial analysis.

Implementation Method 1

the first indicator compound is converted by microorganisms in a first group of microorganisms and microorganisms in a second group of microorganisms to a non-water diffusible first product having a first color; wherein the second indicator compound is converted by the microorganisms in the second group of microorganisms to a water-diffusible second product that forms a second color

Methodology Applied
Scientific EffectColor change reaction:

Implementation Method 2

obtain a first image of the thin film culture device, wherein the first image is produced while providing illumination to the front side of the device; obtain a second image of the thin film culture device, wherein the second image is produced while providing illumination to the back side of the device

Methodology Applied
Scientific EffectLight transmission and reflection:

Data Source

PatentEP3336195B1Method of differentiating microbial colonies in an image
Publication Date: 2020.02.26 3M INNOVATIVE PROPERTIES CO
  • EP3336195B1 patent drawingFigure 1
  • EP3336195B1 patent drawingFigure 2~3
  • EP3336195B1 patent drawingFigure 4

AI summary

A method of identifying microbial colonies in a culture device is provided. The method comprises using an imaging device to produce a first image of a thin film culture device while providing illumination to a front side of the device and to produce a second image of the thin film culture device while providing illumination to a back side of the device. The method further comprises analyzing the first and second images to identify microorganism colonies in each image, analyzing the first and second images values of a size parameter for a colony at a particular location in the culture device, and comparing the values. The method can be used to differentiate and count at least two colony types.