Microfluidic Buffer Fluid Prevents Cross-Contamination

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Solution Overview

Problem

In microfluidic assays, particularly during PCR processes, contamination can occur due to the diffusion or seepage of fluids from nominally 'shut off' ports into the microchannel, especially when multiple fluid-introduction ports communicate without valves to physically block them, leading to potential contamination of assays.

Innovation Solution

A system and method that utilize a non-reactive fluid buffer between input ports and microchannels, employing a negative pressure differential to control fluid flow, ensuring that when an input port is stopped, non-reactive fluid flows into the connecting channel, preventing contamination by replacing potentially contaminating fluids with a non-reactive buffer, thus maintaining assay integrity.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of operation

If multiple fluid-introduction ports communicate with a common microchannel without valves to physically block them, then the device complexity is reduced and ease of operation is improved, but cross-contamination occurs when ports are nominally shut off

Engineering Contradiction:
Improveease of operationVSAvoidassay integrity
Core Design Contradiction:
Ease of operationVSReliability

Solution Approach 1:

A non-reactive fluid buffer is introduced as an intermediary substance between the input ports and the microchannel. When a port is shut off, this buffer fills the inlet channel and prevents contaminating fluids from reaching the microchannel, thus maintaining assay integrity without requiring complex valve mechanisms.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent employs a non-reactive fluid buffer that creates an inert environment within the inlet channels. This buffer does not interfere with the assay reactions and effectively isolates the microchannel from potential contaminants when ports are closed, preserving reliability while maintaining operational simplicity.

Inventive Principle:
Principle #39Inert atmosphere (Inert environment)

2Reliability

If valves are installed at each input port to physically block fluid flow when shut off, then cross-contamination is prevented and assay integrity is maintained, but device complexity increases

Engineering Contradiction:
Improveassay integrityVSAvoiddevice complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

Instead of using mechanical valves, the patent introduces a non-reactive fluid buffer as a mediator that passively prevents contamination. This buffer automatically fills the inlet channels when ports are shut off, providing reliable protection against cross-contamination without adding mechanical complexity.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent replaces the mechanical valve system with a fluid-based solution. Rather than using moving parts to block flow, a non-reactive fluid buffer is used to occupy the inlet channels and prevent contaminant migration, thereby eliminating mechanical complexity while maintaining assay integrity.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

3Reliability

If non-reactive fluid buffer is introduced into inlet channels to prevent contamination, then assay integrity is maintained, but additional fluid handling steps and device complexity are required

Engineering Contradiction:
Improveassay integrityVSAvoiddevice complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The non-reactive fluid buffer serves multiple functions: it prevents cross-contamination when ports are shut off, maintains positive pressure in inlet channels to block contaminant migration, and does not interfere with assay reactions. This multi-functionality justifies the additional fluid handling steps by providing comprehensive protection with a single substance.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach effectively prevents contamination within microfluidic circuits by ensuring that any diffusion or seepage from stopped input ports introduces non-reactive fluid, maintaining the integrity of assays and preventing cross-contamination during fluid handling and processing.

Implementation Method 1

employing a negative pressure differential to control fluid flow

Methodology Applied
Scientific EffectNegative pressure differential: Pressure Gradient

Implementation Method 2

contamination can occur due to the diffusion or seepage of fluids from nominally 'shut off' ports into the microchannel

Methodology Applied
Scientific EffectDiffusion prevention: Diffusion Barrier

Data Source

PatentEP2307882B1System and method to prevent cross-contamination in assays performed in a microfludic channel
Publication Date: 2018.06.27 CANON US LIFE SCIENCES INC
  • EP2307882B1 patent drawingFigure 1
  • EP2307882B1 patent drawingFigure 2
  • EP2307882B1 patent drawingFigure 3

AI summary

The present application discloses systems and methods for preventing contamination in assays performed in microfluidic channels. In one embodiment, a buffer of non-reactive fluid is provided between an input port and a microchannel in which assays are performed during such times that flow from the input port is stopped. In general, an amount of non-reactive fluid is drawn into a channel connecting the stopped input port to the microchannel. Thus, any seepage, or diffusion, from the channel connecting the stopped input port to the microchannel will be of the non-reactive fluid, not the reagent, or other potentially-contaminating fluid, introduced through the input port. In one embodiment, microvalves and a negative pressure differential source control flow of reagents into the microchannel and the flow of non-reactive fluid into the inlet conduits.