Optical Detection System for Microfluidic Alignment

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Solution Overview

Problem

Current optical detection systems for microfluidic devices are large, expensive, and inflexible, with alignment and focusing processes that require flowing fluorescent dye, which is costly and time-consuming, and often unstable.

Innovation Solution

An optical detection system with microfluidic devices featuring etched optical alignment marks on a substrate, bonded with a second substrate to cover channels, using a light-emitting diode and objective lens for alignment and focusing, allowing for alignment and focusing without flowing dye, utilizing a LED light source and a custom-designed high-numerical-aperture objective lens for efficient signal detection.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If multiple high quality lasers and CCD cameras are employed for fluorescence excitation and detection, then detection sensitivity is improved, but system cost and size increase

Engineering Contradiction:
Improvedetection sensitivityVSAvoidsystem cost and size
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent combines multiple functions into a single integrated optical detection system. Instead of using separate lasers and CCD cameras for different channels, the invention uses a single optical detection system with a movable stage that can be positioned over different channels, eliminating the need for multiple independent detection systems while maintaining the ability to detect fluorescent signals from multiple channels.

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The optical detection system is designed to be universal and can detect fluorescent signals from any channel by simply moving the stage to the appropriate position. This multi-functional design allows a single system to replace multiple specialized systems, reducing overall system complexity and cost while maintaining detection sensitivity across all channels.

Inventive Principle:
Principle #6Universality (Multi-functionality)

2Measurement precision

If fluorescent dye is flowed through channels for alignment and focusing, then optical alignment accuracy is improved, but time consumption and cost increase

Engineering Contradiction:
Improveoptical alignment accuracyVSAvoidalignment time
Core Design Contradiction:
Measurement precisionVSLoss of time

Solution Approach 1:

The patent incorporates optical alignment marks that are pre-formed in the microfluidic device structure during manufacturing. These alignment marks are created using photolithography and etching processes, so they are already in place before the device is delivered. This preliminary action eliminates the need for time-consuming alignment procedures using fluorescent dye, as the alignment features are permanently integrated into the device.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

Instead of using fluorescent dye as a temporary alignment reference, the invention uses permanent optical alignment marks that are etched into the substrate. These marks serve as a stable, long-lasting copy of the channel positions, providing consistent alignment references without the need for flowing and flushing dye through the channels.

Inventive Principle:
Principle #26Copying

3Ease of operation

If fluorescent dye is flushed out of channels after focusing, then alignment is completed, but additional time and complexity are required

Engineering Contradiction:
Improvealignment completionVSAvoidoperational complexity
Core Design Contradiction:
Ease of operationVSDevice complexity

Solution Approach 1:

The patent extracts the alignment function from the fluorescent dye-based process and integrates it directly into the device structure through permanent optical alignment marks. This extraction eliminates the need for the flushing operation entirely, as the alignment marks remain in place without requiring dye to be flowed or flushed. The alignment process is simplified to simply reading the position of these permanent marks.

Inventive Principle:
Principle #2Taking out (Extraction)

4Measurement precision

If fluorescent dye is used for alignment, then optical alignment is achieved, but cost and stability issues arise

Engineering Contradiction:
Improvealignment precisionVSAvoiddye stability
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The patent replaces expensive and unstable fluorescent dye with permanent optical alignment marks that are etched into the substrate. These marks are made from the same materials as the device structure (such as silicon or glass), making them stable, reliable, and cost-effective. The alignment marks do not degrade or change properties over time, unlike fluorescent dye which can be unstable and expensive.

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The system is more compact, cost-effective, and flexible, enabling rapid alignment and focusing without the need for expensive and unstable dye, allowing for efficient detection of fluorescent signals from multiple channels with improved sensitivity and reduced operational complexity.

Implementation Method 1

a light-emitting diode, means for collimating light emitted by the light-emitting diode, an objective lens, means for directing the collimated light through the objective lens onto the microfluidic device

Methodology Applied
Scientific EffectLight-emitting diode: Light Emitting Diode

Implementation Method 2

an objective lens, means for directing the collimated light through the objective lens onto the microfluidic device and means for detecting a signal emitted from the microfluidic device

Methodology Applied
Scientific EffectOptical focusing: Lens

Implementation Method 3

aligning and focusing an optical detection system... using light reflected from the one or more optical alignment marks

Methodology Applied
Scientific EffectLight reflection: Reflection

Implementation Method 4

detecting fluorescent signals... means for detecting a signal emitted from the microfluidic device

Methodology Applied
Scientific EffectFluorescence: Fluorescence

Data Source

PatentEP2453223B1Optical detection system for a microfluidic device and method for aligning and focusing an optical detection system
Publication Date: 2019.07.03 CALIPER LIFE SCIENCES INC
  • EP2453223B1 patent drawingFigure 1
  • EP2453223B1 patent drawingFigure 2
  • EP2453223B1 patent drawingFigure 3

AI summary

An optical detection system (100) for a microfluidic device (165) is described. The system (100) includes a microfluidic device (165) including alignment marks; an LED (110); means for collimating light emitted by the LED (110); an objective lens (160); means for directing the collimated light through the objective onto the microfluidic device (165); and means (150) for detecting a signal emitted from the microfluidic device (165). The working distance between the objective (160) and the device (165) allows light from an external LED (110) or laser to be brought in along a diagonal path to illuminate the microfluidic device (165). The microfluidic device (165) includes multiple channels and multiple closed optical alignment marks having curved walls. The marks are illuminated for alignment and focusing purposes by light brought in on a diagonal path from an external LED (110).