Microscope Image Stitching via Structure-Aware Parameter Derivation

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Solution Overview

Problem

Existing microscope image stitching methods often result in distorted images and color/brightness differences when combining partial images of multiwell plates, leading to difficulties in user evaluation and automated analysis due to visible seams and perspective differences.

Innovation Solution

A method and system that define and localize relevant image structures, derive stitching parameters to avoid seams through critical areas, and implement blending to ensure seamless transitions, thereby minimizing distortions and artifacts in the final stitched image.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of manufacture

If known image stitching methods are used to combine microscope images, then the seam locations can be made invisible in the result image, but perspective differences cause distortion of circular features and color/brightness differences that interfere with evaluation and analysis

Engineering Contradiction:
Improveease of image stitchingVSAvoidimage accuracy
Core Design Contradiction:
Ease of manufactureVSManufacturing precision

Solution Approach 1:

The method performs preliminary identification of relevant image structures (such as circular wells in multiwell plates) before the stitching process. By detecting these structures in advance and using them as reference points, the system can calculate transformation parameters that preserve the geometric accuracy of these structures while performing the stitching operation, thus avoiding distortion before it occurs.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The invention changes the parameters used in traditional stitching by incorporating structure-based constraints. Instead of using only intensity-based blending parameters, the system introduces geometric parameters derived from identified image structures (such as circle fitting parameters for wells) to control the stitching transformation, thereby maintaining both visual continuity and geometric accuracy.

Inventive Principle:
Principle #35Parameter changes

2Ease of operation

If blending is applied at seam locations to create soft transitions, then the transition between images becomes less visible, but it becomes unclear whether color/brightness variations are sample properties or processing artifacts

Engineering Contradiction:
Improvevisual continuityVSAvoidinformation reliability
Core Design Contradiction:
Ease of operationVSLoss of information

Solution Approach 1:

The method applies different processing qualities to different regions of the image. At seam locations, blending is applied to ensure visual continuity, but in regions containing identified relevant image structures, the processing is optimized to preserve local color and brightness characteristics. This localized approach allows the system to maintain visual continuity where needed while preserving information reliability in critical regions.

Inventive Principle:
Principle #3Local quality

3Area of stationary object

If multiple partial images are stitched to form an overview image, then the field of view is expanded, but visible seams and distortions make user evaluation and automated analysis more difficult

Engineering Contradiction:
Improvefield of viewVSAvoidevaluation accuracy
Core Design Contradiction:
Area of stationary objectVSReliability

Solution Approach 1:

Before stitching the multiple partial images to expand the field of view, the system performs preliminary detection and localization of relevant image structures across all images. These detected structures serve as reference points that guide the stitching transformation, ensuring that when images are combined to achieve a larger field of view, the resulting overview image maintains high reliability for both visual evaluation and automated analysis.

Inventive Principle:
Principle #10Preliminary action

Data Source

PatentUS11528431B2Microscope and method for processing microscope images
Publication Date: 2022.12.13 CARL ZEISS MICROSCOPY GMBH
  • US11528431B2 patent drawing
  • US11528431B2 patent drawing
  • US11528431B2 patent drawing

AI summary

A microscope comprises a microscope stand, a camera for recording microscope images and a computing device, which is configured to carry out image processing of the recorded microscope images. The computing device is configured to: define relevant image structures; localize relevant image structures in the microscope images; derive stitching parameters from locations of the relevant image structures; and create a result image with the aid of the microscope images, with the stitching parameters being taken into account. Moreover, a corresponding method is described.