Molecular Interaction Analysis via Temperature Jump Relaxation

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Solution Overview

Problem

Current methods for determining characteristic properties of molecular interactions are not fast or reliable enough, particularly in fields like drug design and protein folding, where accurate and efficient analysis is crucial.

Innovation Solution

A method involving a liquid sample with a marker that undergoes a condition jump, such as a temperature or pressure change, followed by reading the marker's signal over time in a microfluidic unit to determine molecular interaction properties, ensuring homogeneous heating and minimizing sample degradation.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If conventional methods are used to determine molecular interaction properties, then the analysis can be performed, but the determination is not fast or reliable enough

Engineering Contradiction:
Improvespeed of determinationVSAvoidaccuracy of determination
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent applies parameter changes by subjecting the sample to a condition jump (change in temperature, pressure, or other physical conditions) to perturb the molecular interactions from equilibrium. This allows the system to relax back to equilibrium and provides measurable signals about interaction characteristics. By changing physical parameters and monitoring the relaxation process, the method achieves both fast and reliable determination of molecular interaction properties.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent replaces conventional mechanical or chemical analysis methods with a physical condition jump approach combined with signal detection. Instead of using complex mechanical separation or chemical reactions to study molecular interactions, the method uses physical condition changes (temperature, pressure) and monitors the resulting signal changes, providing a faster and more reliable measurement approach.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

2Measurement precision

If a condition jump is applied to bring the particle in a non-equilibrium state, then the relaxation process can be measured, but the sample may be degraded

Engineering Contradiction:
Improveaccuracy of molecular interaction propertyVSAvoidsample degradation
Core Design Contradiction:
Measurement precisionVSObject-affected harmful factors

Solution Approach 1:

The patent employs periodic or controlled condition jumps followed by relaxation periods. By applying the condition jump in a controlled manner and allowing the system to relax, the method obtains precise measurement data while minimizing cumulative damage to the sample. The periodic nature of the measurement cycles allows for repeated analyses without progressive degradation.

Inventive Principle:
Principle #19Periodic action

Solution Approach 2:

The patent uses a marker or probe as an intermediary to indirectly measure the molecular interaction properties. Instead of directly observing the molecular interactions which may be sensitive to degradation, the marker provides a measurable signal that reflects the interaction state, allowing measurement without direct manipulation of the sensitive molecular components.

Inventive Principle:
Principle #24Intermediary (Mediator)

3Reliability

If the marker signal is read out over time during relaxation, then accurate molecular interaction properties can be determined, but the measurement time increases

Engineering Contradiction:
Improveaccuracy of molecular interaction propertyVSAvoidmeasurement duration
Core Design Contradiction:
ReliabilityVSLoss of time

Solution Approach 1:

The patent performs preliminary actions by pre-equilibrating the sample before the condition jump and preparing the detection system in advance. This allows the relaxation process to be measured more efficiently from the point of perturbation, reducing the total measurement time while maintaining accuracy. The preliminary preparation ensures that the relaxation signal is clear and measurable from the start.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent maintains continuous monitoring of the marker signal throughout the relaxation process, ensuring that the measurement captures the complete relaxation trajectory. By continuously reading the signal without interruption and analyzing the entire relaxation curve, the method achieves accurate molecular interaction properties without requiring additional time for repeated measurements.

Inventive Principle:
Principle #20Continuity of useful action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach provides accurate and rapid determination of molecular interaction characteristics, suitable for complex analyses like protein folding and drug design, with improved reliability and efficiency.

Implementation Method 1

subjecting the sample to a condition jump comprising a jump in temperature from at least one first temperature to a second temperature

Methodology Applied
Scientific EffectTemperature jump: Thermal Shock

Implementation Method 2

the particle comprises a marker in at least one of its state of equilibrium and state of non-equilibrium

Methodology Applied
Scientific EffectFluorescence: Fluorescence

Data Source

PatentUS20240310371A1Method, an apparatus, an assembly and a system suitable for determining a characteristic property of a molecular interaction
Publication Date: 2024.09.19 FIDA BIOSYSTEMS APS
  • US20240310371A1 patent drawing
  • US20240310371A1 patent drawing
  • US20240310371A1 patent drawing

AI summary

A method, an assembly and a system for determining a characteristic property of a molecular interaction. The method includes providing a liquid sample including a particle capable of being in a state of equilibrium and in a state of non-equilibrium. The particle includes a marker in at least one of its state of equilibrium and state of non-equilibrium. The method further includes bringing the particle in a state of non-equilibrium by subjecting the sample to a condition jump comprising a jump in temperature and/or pressure; reading out the marker as a function of time during at least a portion of a relaxation time for said particle, and determining said characteristic property of said molecular interaction.