3′-End Oligonucleotide Stabilization for In Vivo mRNA Persistence

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Solution Overview

Problem

Nucleic acids such as mRNA have low stability in vivo due to degradation by nucleases, leading to a rapid decrease in concentration and reduced medical efficacy.

Innovation Solution

Introducing an oligonucleotide or its derivative with a specific structure to the 3′-end of the polynucleotide, such as mRNA, to enhance stability, using a polynucleotide represented by specific formulas with a 5′-cap structure and a phosphodiester bond at the 3′-end.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If mRNA is administered to subjects, then medical efficacy is achieved through protein biosynthesis, but stability in vivo is low due to nuclease degradation

Engineering Contradiction:
Improvemedical efficacyVSAvoidstability in vivo
Core Design Contradiction:
ReliabilityVSStability of the object's composition

Solution Approach 1:

The patent introduces a stabilizing sequence as an intermediary element that mediates between the mRNA and nucleases. This specific nucleotide sequence acts as a protective intermediary that reduces nuclease accessibility and degradation, thereby improving in vivo stability while preserving the mRNA's ability to function

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent modifies the nucleotide sequence parameters by introducing specific stabilizing sequences with particular compositional characteristics (such as GC content, secondary structure formation, and specific motif sequences). These parameter changes in the sequence composition enhance resistance to degradation without compromising the coding function

Inventive Principle:
Principle #35Parameter changes

2Duration of action of moving object

If mRNA concentration is maintained in vivo, then medical efficacy is sustained, but concentration rapidly decreases due to degradation

Engineering Contradiction:
Improveduration of medical efficacyVSAvoidmRNA concentration
Core Design Contradiction:
Duration of action of moving objectVSQuantity of substance

Solution Approach 1:

The stabilizing sequence is incorporated into the mRNA structure in advance (preliminarily) before administration. This preliminary structural modification prepares the mRNA for extended survival in vivo by pre-establishing protective features that prevent rapid degradation, thereby sustaining concentration over time

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The stabilizing sequence enables continuous maintenance of functional mRNA concentration in vivo. By preventing degradation, the sequence ensures that the mRNA continues to perform its protein-synthesis function over an extended period, maintaining continuous useful action rather than rapid decay

Inventive Principle:
Principle #20Continuity of useful action

Data Source

PatentUS20250346624A1Polynucleotide and producing method thereof
Publication Date: 2025.11.13 EISAI R&D MANAGEMENT CO LTD
  • US20250346624A1 patent drawing
  • US20250346624A1 patent drawing
  • US20250346624A1 patent drawing

AI summary

Disclosed are a polynucleotide with improved stability in vivo, a producing method thereof, and a method of improving the stability of polynucleotide in vivo.