Msi2 Protein Mutation for Haploid Plant Production

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Solution Overview

Problem

Current methods for producing haploid and doubled haploid plants in agriculture are time-consuming and costly, with limited applicability across crop species due to the high heterozygosity in breeding material, and existing modifications to the CenH3 protein have not been effective in inducing uni-parental genome elimination in crop plants.

Innovation Solution

Introduction of a loss-of-function mutation in the Msi2 protein, specifically a unique single nucleotide polymorphism resulting in a premature stop codon or amino acid modification, to induce haploid offspring when crossed with a wild-type plant, allowing for the generation of haploid and doubled haploid plants in Solanum lycopersicum.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If microspore culture method is used to produce haploid plants, then haploid plants can be obtained, but the process is costly and time-consuming

Engineering Contradiction:
Improvehaploid plant production efficiencyVSAvoidtime required for haploid plant production
Core Design Contradiction:
ProductivityVSLoss of time

Solution Approach 1:

The invention changes the genetic parameter by introducing a loss-of-function mutation in the Msi2 protein (specifically a premature stop codon at position 126), which fundamentally alters the mechanism of haploid plant production from tissue culture-based microspore culture to a genetic manipulation approach that induces uni-parental genome elimination through modified protein function

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The invention replaces the mechanical/tissue culture-based microspore culture system with a molecular genetic system that uses protein mutation to achieve haploid plant production, substituting physical culture techniques with genetic mechanism manipulation

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

2Adaptability or versatility

If CenH3 protein modification is used to induce uni-parental genome elimination, then haploid plants can be produced in model plants, but the method has not been effective in crop plants

Engineering Contradiction:
Improveapplicability across crop speciesVSAvoideffectiveness of CenH3 modification
Core Design Contradiction:
Adaptability or versatilityVSReliability

Solution Approach 1:

The invention changes the target protein from CenH3 to Msi2, and introduces a specific loss-of-function mutation (premature stop codon at position 126) in the Msi2 protein, which has been shown to effectively induce uni-parental genome elimination in crop plants including tomato, thereby improving reliability and adaptability

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The invention uses a synthetic biology approach where a specific mutated Msi2 protein sequence (with premature stop codon) is introduced into the plant genome, creating a functional copy of the protein with desired haploid-inducing properties that can be applied across crop species

Inventive Principle:
Principle #26Copying

3Manufacturing precision

If extensive population screening is performed to reduce heterozygosity, then beneficial traits can be selected, but the process is laborious and costly

Engineering Contradiction:
Improveselection accuracy for beneficial traitsVSAvoidcomplexity of breeding process
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

The invention performs preliminary action by inducing uni-parental genome elimination through Msi2 protein mutation to create haploid plants with homozygous genomes before the actual selection process, thereby eliminating the need for extensive subsequent screening and selfing generations

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The invention skips the traditional multiple generations of selfing and screening by using haploid plant technology, which directly produces homozygous plants in one generation, thereby rushing through the time-consuming selection process

Inventive Principle:
Principle #21Skipping (Rushing through)

Data Source

PatentUS11576318B2Method for the production of haploid and subsequent doubled haploid plants
Publication Date: 2023.02.14 KEYGENE NV
  • US11576318B2 patent drawing

AI summary

It was found that plants with loss of functional Msi2 protein due to a nucleotide polymorphism resulting in the introduction of a premature stop codon in the Msi2 protein, are able to induce haploid offspring after a cross to or with a wild type plant comprising a functional Msi2 protein. The invention relates to generation of haploid and doubled haploid plants.