Multi-Gene Edited Anti-CD19 CAR-T Cells for Enhanced Persistence

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Solution Overview

Problem

Current CAR-T cell therapy faces challenges in improving T cell persistence in culture, which affects manufacturing and clinical applications, particularly in achieving long-term durability and reducing immunosuppressive effects in the tumor microenvironment.

Innovation Solution

Genetically engineered anti-CD19 CAR-T cells with disruptions in the Regnase 1 (Reg1), Transforming Growth Factor Beta Receptor II (TGFBRII), and beta-2 microglobulin (β2M) genes, using CRISPR/Cas-mediated gene editing, are developed to enhance expansion and persistence, reducing immunosuppression and improving therapeutic efficacy.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Duration of action of moving object

If conventional CAR-T cell therapy is used, then initial anti-tumor activity is achieved, but T cell persistence in culture is limited

Engineering Contradiction:
ImproveT cell persistenceVSAvoidtherapeutic durability
Core Design Contradiction:
Duration of action of moving objectVSReliability

Solution Approach 1:

The patent applies parameter changes by disrupting multiple genes (Regnase 1, TGFBRII, TRAC, β2M) in CAR-T cells to alter their biological parameters. Specifically, Regnase 1 disruption increases mRNA stability and protein half-life, TGFBRII disruption reduces immunosuppression, TRAC disruption prevents graft-versus-host disease, and β2M disruption reduces host-versus-graft response. These parameter changes enable prolonged T cell persistence and enhanced therapeutic durability.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent creates a composite genetic modification approach by combining multiple gene disruptions (Regnase 1, TGFBRII, TRAC, β2M) within a single CAR-T cell population. This composite approach synergistically enhances T cell persistence, reduces immunosuppression, prevents autoimmune reactions, and improves overall therapeutic durability beyond what single-gene edits could achieve.

Inventive Principle:
Principle #40Composite materials

2Reliability

If T cell persistence is improved through gene disruption, then therapeutic efficacy is enhanced, but manufacturing complexity increases

Engineering Contradiction:
Improvetherapeutic efficacyVSAvoidmanufacturing complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent applies preliminary action by pre-disrupting multiple genes (Regnase 1, TGFBRII, TRAC, β2M) in donor T cells before CAR transduction and infusion. This preliminary genetic modification is performed in a standardized pipeline using CRISPR/Cas9 or other gene editing technologies, allowing the complex multi-gene disruption to be achieved through established manufacturing protocols rather than ad-hoc approaches.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent uses copying by creating standardized gene disruption templates and using them across multiple CAR-T cell manufacturing batches. The same CRISPR guide RNAs and editing protocols can be replicated to consistently disrupt the same genes (Regnase 1, TGFBRII, TRAC, β2M) in different donor T cell populations, ensuring manufacturing consistency despite the complexity of multi-gene editing.

Inventive Principle:
Principle #26Copying

3Reliability

If multiple genes are disrupted to enhance CAR-T cell function, then antitumor activity increases, but risk of off-target effects increases

Engineering Contradiction:
Improveantitumor activityVSAvoidoff-target effects
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent applies local quality by precisely targeting specific genes (Regnase 1, TGFBRII, TRAC, β2M) for disruption using CRISPR guide RNAs designed to affect only these specific loci. Each guide RNA is optimized to bind selectively to its target sequence, ensuring that the gene disruptions occur at the intended locations without causing off-target effects in other genomic regions.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent converts potential harm from multi-gene disruption into benefit by carefully selecting which genes to disrupt. The disruption of Regnase 1, TGFBRII, TRAC, and β2M, while increasing manufacturing complexity, produces CAR-T cells with enhanced persistence, reduced immunosuppression, and improved safety profiles that ultimately increase antitumor efficacy and reduce off-target harmful effects.

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The genetically modified CAR-T cells exhibit increased expansion and functional persistence, leading to enhanced therapeutic efficacy against CD19+ cancers, with synergistic effects observed in animal models, allowing for effective treatment at lower doses and prolonged antitumor activity.

Implementation Method 1

The CARs may be introduced into the T cells using CRISPR/Cas9 gene editing technology

Methodology Applied
Scientific EffectCRISPR/Cas9 gene editing:

Implementation Method 2

the disruption of both the Reg1 gene and the TGFBRII gene showed synertistic effect in increasing CAR-T cell expansion and functional persistence

Methodology Applied
Scientific EffectGene disruption:

Implementation Method 3

the receptors enable the T cells to kill cancer cells

Methodology Applied
Scientific EffectAntigen recognition:

Implementation Method 4

When these allogeneic CAR T cells are injected into a patient, the receptors enable the T cells to kill cancer cells

Methodology Applied
Scientific EffectCytotoxicity:

Data Source

PatentUS20230303713A1Anti-CD19 car-t cells with multiple gene edits and therapeutic uses thereof
Publication Date: 2023.09.28 CRISPR THERAPEUTICS AG
  • US20230303713A1 patent drawing
  • US20230303713A1 patent drawing
  • US20230303713A1 patent drawing

AI summary

Genetically engineered T cells expressing a chimeric antigen receptor (CAR) targeting CD19 and having multiple genetic edits, including a disrupted TRAC gene, a disrupted β2M gene, a disrupted Regnase 1 gene, and/or a disrupted TGFBRII gene. Also provided herein are methods of making such genetically engineered T cells and methods of using the genetically engineered T cells in cancer treatment.