Multi-chain CARs with Segmented Signaling Domains

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Solution Overview

Problem

Current chimeric antigen receptor (CAR) architectures, which are built as single fusion molecules, require serial appending of signaling domains, disrupting their natural juxtamembrane positions and impairing function, while existing adoptive immunotherapy using autologous cells faces challenges such as high costs, logistical hurdles, and immune rejection issues with allogeneic cells.

Innovation Solution

Design of multi-chain CARs with separate polypeptide subunits placing signaling domains in their natural juxtamembrane positions, allowing for flexible architecture with additional extracellular ligand binding domains and co-stimulatory molecules, and genetic modification of immune cells to be non-alloreactive and resistant to immunosuppressive agents.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of manufacture

If CARs are designed as single fusion molecules with serial appending of signaling domains, then the structure is simplified and easier to manufacture, but the signaling domains are displaced from their natural juxtamembrane positions impairing their function

Engineering Contradiction:
Improveease of manufactureVSAvoidfunctionality
Core Design Contradiction:
Ease of manufactureVSReliability

Solution Approach 1:

The CAR is divided into separate polypeptide chains: one containing the extracellular ligand-binding domain and others containing the signal-transducing domains in their natural juxtamembrane positions. This segmentation restores the natural positioning of signaling domains while maintaining manufacturability through modular assembly of separate components.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent introduces transmembrane polypeptides as intermediaries that bridge the extracellular ligand-binding domain and the intracellular signal-transducing domains. These intermediaries maintain the natural juxtamembrane positioning of signaling domains while enabling functional communication across the membrane.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Reliability

If autologous CAR T cells are used for immunotherapy, then the cells are genetically matched to the patient avoiding rejection, but the treatment faces high costs and logistical hurdles

Engineering Contradiction:
ImprovecompatibilityVSAvoidcomplexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent creates allogeneic CAR T cell products that can be standardized and pre-manufactured, serving as copies that are genetically matched to patient groups rather than requiring custom autologous cell generation for each patient. This reduces the complexity and cost while maintaining therapeutic effectiveness.

Inventive Principle:
Principle #26Copying

Solution Approach 2:

The patent modifies the genetic parameters of CAR T cells through CRISPR/Cas9-mediated gene editing to achieve non-alloreactivity and immunosuppressive resistance, enabling standardized allogeneic products that can be stored and administered without requiring patient-specific customization.

Inventive Principle:
Principle #35Parameter changes

3Device complexity

If allogeneic CAR T cells are used for immunotherapy, then the treatment can be standardized and pre-manufactured reducing costs and complexity, but the cells face immune rejection by the host

Engineering Contradiction:
ImprovecomplexityVSAvoidcompatibility
Core Design Contradiction:
Device complexityVSReliability

Solution Approach 1:

The patent applies preliminary genetic modification using CRISPR/Cas9 to knock out alloreactive genes and introduce immunosuppressive resistance markers before cell manufacturing. This preliminary anti-action prevents immune rejection upon administration, enabling standardized allogeneic products to be compatible with multiple patients.

Inventive Principle:
Principle #9Preliminary anti-action

Solution Approach 2:

The patent creates composite genetically modified cells combining multiple functions: CAR expression, non-alloreactivity through gene knockout, and immunosuppressive resistance. This composite approach integrates multiple protective and functional properties into a single cell product that can be standardized and stored.

Inventive Principle:
Principle #40Composite materials

4Reliability

If signaling domains are placed in natural juxtamembrane positions in multi-chain CARs, then the functionality is improved, but the structural complexity increases

Engineering Contradiction:
ImprovefunctionalityVSAvoidcomplexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The CAR is segmented into separate polypeptide chains with distinct functions: one chain contains the extracellular ligand-binding domain while other chains contain the signal-transducing domains in their natural juxtamembrane positions. This segmentation enables improved functionality while the modular nature keeps the overall structure manageable.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent employs universal transmembrane polypeptide frameworks (such as FcεRI chains) that can serve multiple functions: providing the structural basis for juxtamembrane positioning, enabling signal transduction, and facilitating assembly with different extracellular ligand-binding domains. This multi-functionality reduces the need for entirely new structural elements.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Data Source

PatentEP2893004B1Multi-chain chimeric antigen receptor and uses thereof
Publication Date: 2018.10.24 CELLECTIS SA
  • EP2893004B1 patent drawingFigure 1~2
  • EP2893004B1 patent drawingFigure 3
  • EP2893004B1 patent drawingFigure 4A~4B

AI summary

The present invention relates to the generation of chimeric antigen receptors (CAR) referred to as multi-chain CARs. Such CARs, which aim to redirect immune cell specificity and reactivity toward a selected target exploiting the ligand-binding domain properties, comprise separate extracellular ligand binding and signaling domains in different transmembrane polypeptides. The signaling domains are designed to assemble in juxtamembrane position, which forms flexible architecture closer to natural receptors, that confers optimal signal transduction. The invention encompasses the polynucleotides, vectors encoding said multi- chain CAR and the isolated cells expressing them at their surface, in particularly for their use in immunotherapy. The invention opens the way to efficient adoptive immunotherapy strategies for treating cancer and viral infections.