Mutant C. difficile toxins reduce cytotoxicity

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Solution Overview

Problem

Current treatments for Clostridium difficile infections, particularly recurrences, are ineffective, with high recurrence rates and limited therapeutic options for managing the cytotoxic effects of toxins A and B, which cause significant gastrointestinal disease.

Innovation Solution

Development of mutant Clostridium difficile toxins A and B with specific mutations at residues 285, 287, 700, 972, and 978 for toxin A, and 286, 288, 698, 970, 976 for toxin B, which are less cytotoxic and used in immunogenic compositions to elicit neutralizing antibodies, along with optimized culture media using soy hydrolysate and yeast extract for toxin production.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Object-affected harmful factors

If wild-type C. difficile toxins A and B are used, then strong cytotoxic effect is achieved, but high harmfulness to host cells occurs

Engineering Contradiction:
ImprovecytotoxicityVSAvoidtherapeutic safety
Core Design Contradiction:
Object-affected harmful factorsVSReliability

Solution Approach 1:

The patent applies parameter changes by introducing specific point mutations at residues 285, 287, 700, 972, and 978 in toxin A, and residues 286, 288, 698, 970, and 976 in toxin B. These mutations alter the amino acid sequence and biochemical properties of the toxins, reducing their cytotoxic activity while preserving their immunogenicity. The mutations specifically affect the glucosyltransferase domain and cysteine protease domain, modifying the toxins' ability to glucosylate host cell proteins and cause cell death.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If mutant toxins with reduced cytotoxicity are created, then therapeutic safety is improved, but immunogenicity may be compromised

Engineering Contradiction:
Improvetherapeutic safetyVSAvoidneutralizing antibody response
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent applies local quality by making targeted mutations at specific residue positions while maintaining the overall structure and immunogenic epitopes of the toxins. The mutations are localized to specific regions (residues 285-287 in the glucosyltransferase domain and residues 700, 972-978 in other domains) that are less critical for immune recognition, thereby preserving the toxin's ability to elicit neutralizing antibodies while reducing cytotoxicity.

Inventive Principle:
Principle #3Local quality

3Ease of manufacture

If standard culture media are used for toxin production, then manufacturing simplicity is maintained, but toxin yield and purity are insufficient

Engineering Contradiction:
Improveculture medium simplicityVSAvoidtoxin production yield
Core Design Contradiction:
Ease of manufactureVSProductivity

Solution Approach 1:

The patent applies parameter changes by modifying the composition of the culture medium, specifically using soy hydrolysate as the carbon source instead of traditional glucose or other simple sugars. This parameter change in the culture medium composition optimizes the metabolic pathway of C. difficile, enhancing toxin production yield and purity while maintaining reasonable manufacturing simplicity. The soy hydrolysate provides a more suitable carbon source that promotes efficient toxin synthesis.

Inventive Principle:
Principle #35Parameter changes

Data Source

PatentUS20250002875A1Compositions and methods relating to a mutant clostridium difficile toxin
Publication Date: 2025.01.02 PFIZER INC
  • US20250002875A1 patent drawing
  • US20250002875A1 patent drawing
  • US20250002875A1 patent drawing

AI summary

In one aspect, the invention relates to an immunogenic composition that includes a mutant Clostridium difficile toxin A and/or a mutant Clostridium difficile toxin B. The mutant toxin may include a glucosyltransferase domain having at least one mutation and a cysteine protease domain having at least one mutation, relative to the corresponding wild-type C. difficile toxin. The mutant toxins may include at least one amino acid that is chemically crosslinked. In another aspect, the invention relates to methods and compositions for use in culturing Clostridium difficile and in producing C. difficile toxins.