Nanog shRNA Viral Vector for Colorectal Cancer Therapy

Resolve Bottlenecks,
Find Innovative Solutions
Generate Solutions

Solution Overview

Problem

Current treatments for colorectal carcinoma (CRC) lack effective therapeutics to prevent and treat the disease, with Nanog and its pseudogene, NanogP8, playing a crucial role in cancer stem cell maintenance and resistance to chemotherapy, necessitating a targeted approach to inhibit their expression.

Innovation Solution

Development of a pharmaceutical composition comprising an oligonucleotide that selectively knocks down expression of either Nanog or NanogP8 using a viral vector, such as a lentivirus or adenovirus, to inhibit cancer cell proliferation and induce apoptosis, specifically designed to target colorectal cancer cells.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If current treatments for colorectal carcinoma are used, then treatment is provided, but effective therapeutics to prevent and treat the disease are lacking

Engineering Contradiction:
Improveeffectiveness of therapyVSAvoidlack of effective therapeutics
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent extracts and targets specific molecular components (Nanog and NanogP8 pseudogene) that are critical for cancer stem cell maintenance. By isolating and suppressing these specific targets using shRNA vectors, the invention achieves effective therapy where conventional treatments fail, directly addressing the lack of effective therapeutics for CRC.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent changes the molecular parameter expression by silencing Nanog and NanogP8 through RNA interference. This parameter change in gene expression translates to reduced cancer stem cell proliferation and increased apoptosis, providing effective therapeutic action against colorectal carcinoma.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If Nanog and NanogP8 are inhibited, then cancer cell growth is suppressed, but selective targeting is required to avoid affecting normal cells

Engineering Contradiction:
Improvecancer cell growth suppressionVSAvoidselectivity and off-target effects
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent segments the targeting approach by designing separate shRNA constructs specific for Nanog and NanogP8. This segmentation allows independent optimization of each target's specificity, ensuring that normal cells expressing Nanog are not affected while cancer stem cells with NanogP8 are selectively eliminated.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The invention applies local quality by creating cell-type specific targeting. The shRNA vectors are designed to preferentially express in cancer stem cells based on their unique expression profile of NanogP8, while sparing normal intestinal cells that do not express NanogP8, thus achieving selective suppression without harmful off-target effects.

Inventive Principle:
Principle #3Local quality

3Reliability

If viral vectors are used to deliver shRNA, then efficient gene silencing is achieved, but vector safety and replication control must be maintained

Engineering Contradiction:
Improvegene silencing efficiencyVSAvoidvector safety and replication control
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent converts the potential harm of viral vector replication into a benefit by using replication-deficient vectors. The viral vectors are engineered to be unable to replicate in normal cells, ensuring safety while maintaining efficient gene silencing through the delivered shRNA. This approach turns the vector's replicative capability into a controlled feature that enhances delivery without causing harmful replication.

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The approach effectively inhibits cancer cell growth, tumorigenicity, and metastasis by selectively targeting Nanog or NanogP8, demonstrating significant reduction in tumor formation and metastatic potential in preclinical models, offering a promising therapeutic strategy for CRC.

Implementation Method 1

an inhibitory RNA molecule, comprising an oligonucleotide that knocks down expression of either Nanog or NanogP8

Methodology Applied
Scientific EffectRNA interference:

Data Source

PatentUS9988631B2Pharmaceutical composition comprising Nanog shRNA, and method of using Nanog shRNA to treat cancer
Publication Date: 2018.06.05 THE GOVERNMENT OF THE UNITED STATES OF AMERICA AS REPRESENTED BY THE SECRETARY DEPARTMENT OF HEALTH & HUMAN SERVICES
  • US9988631B2 patent drawing
  • US9988631B2 patent drawing
  • US9988631B2 patent drawing

AI summary

The present description relates to an inhibitory RNA molecule, comprising an oligonucleotide that selectively knocks down expression a Nanog pseudogene expressed in many human cancers, a replicating viral vector capable of encoding such inhibitory RNA molecule, pharmaceutical compositions comprising said vector, and methods of treating cancer by administration of said pharmaceutical composition.