Organoid Arrays in Bioengineered Hydrogel Microwells

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Solution Overview

Problem

Current methods for growing organoids in arrays face limitations such as inadequate mimicry of native microenvironments, artifacts from Matrigel, and heterogeneity in viability, size, and shape, which hinder high-throughput analysis and pharmaceutical drug screening.

Innovation Solution

A high-throughput microwell platform using bioengineered hydrogels allows for the reproducible growth of organoids in situ, enabling controlled formation and co-culture with stromal cells, and facilitates automated analysis by maintaining organoids within a single focal plane.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If conventional plastic microwell arrays are used for organoid culture, then high-throughput screening capability is achieved, but organoid formation is inhibited due to inadequate mimicry of native microenvironment

Engineering Contradiction:
Improvehigh-throughput screening capabilityVSAvoidorganoid formation and development
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The invention changes the material parameter of the microwell array from conventional plastic to bioengineered hydrogel, which fundamentally alters the microenvironment properties to better mimic native tissue conditions while preserving the array format for high-throughput applications

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The invention uses composite hydrogel materials that combine the structural properties needed for microwell formation with bioactive components that support organoid development, creating a material system that satisfies both high-throughput and biological fidelity requirements

Inventive Principle:
Principle #40Composite materials

2Reliability

If Matrigel is used as culture matrix, then organoid growth is supported, but artifacts are introduced that compromise data quality

Engineering Contradiction:
Improveorganoid growth supportVSAvoidculture artifacts
Core Design Contradiction:
ReliabilityVSObject-generated harmful factors

Solution Approach 1:

The invention replaces Matrigel with synthetic hydrogel materials that can be precisely controlled and discarded, eliminating batch-to-batch variability and unknown components present in Matrigel while maintaining organoid growth support

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Solution Approach 2:

The invention changes the chemical composition parameters of the culture matrix from animal-derived Matrigel to defined synthetic hydrogels, eliminating artifacts while preserving essential growth-supporting properties through controlled material design

Inventive Principle:
Principle #35Parameter changes

3Productivity

If stem cells are seeded directly into conventional microwells, then high-throughput format is maintained, but organoid heterogeneity increases in viability, size, and shape

Engineering Contradiction:
Improvehigh-throughput formatVSAvoidorganoid uniformity
Core Design Contradiction:
ProductivityVSManufacturing precision

Solution Approach 1:

The invention applies local quality control by engineering specific regions within each microwell to have optimized properties for uniform organoid formation, ensuring consistent cell aggregation and development across all wells while maintaining high-throughput format

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The invention performs preliminary action by pre-characterizing and standardizing the hydrogel microwell properties before cell seeding, ensuring that each well is prepared with optimal conditions for producing uniform organoids, thereby reducing heterogeneity in the final product

Inventive Principle:
Principle #10Preliminary action

4Reliability

If organoids are grown in three-dimensional matrices, then biological fidelity is improved, but automated imaging and analysis become difficult

Engineering Contradiction:
Improvebiological fidelityVSAvoidimaging and analysis complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The invention segments the three-dimensional growth environment into discrete microwell compartments within an array, allowing each organoid to develop in 3D while maintaining a structured, addressable format that simplifies automated imaging and data analysis

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The invention organizes three-dimensionally grown organoids into a two-dimensional array layout, enabling the preservation of 3D biological fidelity while adding the organizational dimension of spatial regularity that facilitates automated microscopy and high-throughput analysis

Inventive Principle:
Principle #17Another dimension (Dimensionality change)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach enables consistent, reproducible organoid arrays that can be independently imaged and tracked over time, enhancing high-throughput drug screening and therapy development by overcoming previous limitations in organoid culture and analysis.

Implementation Method 1

overlaying the multicellular aggregates of (ii) with an overlay comprising a hydrogel

Methodology Applied
Scientific EffectHydrogel: Hydrogel

Data Source

PatentEP3515600B1Organoid arrays
Publication Date: 2023.05.10 ECOLE POLYTECHNIQUE FEDERALE DE LAUSANNE (EPFL)
  • EP3515600B1 patent drawingFigure 1a~1f
  • EP3515600B1 patent drawingFigure 2a~2g
  • EP3515600B1 patent drawingFigure 3a~3j

AI summary

The invention provides methods for producing arrays of organoids, the arrays thereof and uses of such arrays.