PD-L1 Binding Polypeptide Segmentation for Tissue Penetration

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Solution Overview

Problem

Current cancer therapies, particularly those targeting the PD-1/PD-L1 pathway, face limitations such as immune-related toxicities and suboptimal tissue distribution due to the large size of monoclonal antibodies, necessitating the development of more effective and safer agents with high affinity for PD-L1 for therapeutic, prognostic, and diagnostic applications.

Innovation Solution

Development of multispecific PD-L1 binding polypeptides, including bispecific agents, with a defined PD-L1 binding motif that allows efficient interaction with PD-L1, potentially offering improved therapeutic and diagnostic capabilities while minimizing toxicities.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If monoclonal antibodies are used to target PD-1/PD-L1 pathway, then therapeutic efficacy is improved, but immune-related toxicities increase and tissue distribution becomes suboptimal due to large molecular size

Engineering Contradiction:
Improvetherapeutic efficacyVSAvoidimmune-related toxicities
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent segments the large monoclonal antibody into smaller polypeptide components (e.g., nanobodies, single-domain antibodies) that retain PD-L1 binding capability. This segmentation reduces molecular size to improve tissue penetration while maintaining therapeutic efficacy and reducing immune-related toxicities associated with full-sized antibodies.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The invention extracts the essential PD-L1 binding function from the complete monoclonal antibody structure, isolating the minimal functional unit (polypeptide with PD-L1 binding motif) that can deliver therapeutic effect without the unnecessary bulk of the full antibody, thereby improving safety profile.

Inventive Principle:
Principle #2Taking out (Extraction)

2Reliability

If monoclonal antibodies are used to target PD-1/PD-L1 pathway, then therapeutic efficacy is improved, but tissue distribution becomes suboptimal due to large molecular size

Engineering Contradiction:
Improvetherapeutic efficacyVSAvoidmolecular size
Core Design Contradiction:
ReliabilityVSVolume of moving object

Solution Approach 1:

The patent divides the large monoclonal antibody into smaller polypeptide fragments (nanobodies, single-domain antibodies) that maintain PD-L1 binding affinity. This size reduction improves tissue distribution and penetration while preserving the essential therapeutic function through careful design of the binding motif.

Inventive Principle:
Principle #1Segmentation

3Volume of moving object

If smaller polypeptides are used to improve tissue distribution, then molecular size is reduced, but binding affinity and specificity for PD-L1 may be compromised

Engineering Contradiction:
Improvemolecular sizeVSAvoidbinding affinity
Core Design Contradiction:
Volume of moving objectVSReliability

Solution Approach 1:

The invention focuses optimization on the local binding interface (PD-L1 binding motif) within the polypeptide, ensuring high affinity and specificity at this critical region while keeping the rest of the molecule small. This localized optimization maintains strong binding despite reduced overall molecular size.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent systematically optimizes parameters of the polypeptide sequence (amino acid composition, structural conformation, binding motif configuration) to maximize PD-L1 binding affinity within the constraints of small molecular size, achieving both compact structure and high binding strength.

Inventive Principle:
Principle #35Parameter changes

Data Source

PatentUS11155596B2Polypeptide
Publication Date: 2021.10.26 AFFIBODY TECH AB
  • US11155596B2 patent drawing
  • US11155596B2 patent drawing
  • US11155596B2 patent drawing

AI summary

The present disclosure relates to a class of engineered polypeptides having a binding affinity for programmed death-ligand 1 (PD-L1), and provides a PD-L1 binding polypeptide comprising the sequence ERNX4AAX7EIL X11LPNLX16X17X18QX20 WAFIWX26LX28D. The present disclosure also relates to the use of such a PD-L1 binding polypeptide as a therapeutic, prognostic and/or diagnostic agent.