PD1 Binding Antibody Humanization via Local Quality

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Solution Overview

Problem

Current antibody therapeutics targeting PD1 for cancer treatment face challenges due to inefficiencies in humanization processes, leading to reduced binding affinity and increased immunogenicity, with existing methods failing to accurately predict residue modifications that maintain antigen binding while minimizing clinical risks.

Innovation Solution

Development of anti-PD1 antibodies with specific heavy and light chain variable region sequences that enhance binding specificity and affinity to human and cynomolgus monkey PD1, while reducing off-target binding and immunogenicity, through a process involving CDR grafting and mutagenesis to achieve optimal humanization and stability.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Object-affected harmful factors

If CDR grafting and back mutations are used to humanize antibodies, then immunogenicity is reduced, but binding affinity is reduced

Engineering Contradiction:
ImproveimmunogenicityVSAvoidbinding affinity
Core Design Contradiction:
Object-affected harmful factorsVSReliability

Solution Approach 1:

The patent applies local quality by making different parts of the antibody have different properties: the CDR loops retain non-human sequences to maintain high binding affinity to PD1, while the framework regions are humanized to reduce immunogenicity. This selective humanization approach allows each region to optimize its function locally.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

Instead of the conventional approach of humanizing CDRs and back-mutating frameworks, this patent inverts the strategy by humanizing only the framework regions while keeping CDRs in their original non-human form. This reversal maintains binding affinity while achieving humanization benefits.

Inventive Principle:
Principle #13The other way round (Inversion)

2Reliability

If more murine residues are introduced to restore binding affinity, then binding affinity is improved, but immunogenicity increases

Engineering Contradiction:
Improvebinding affinityVSAvoidimmunogenicity
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent applies local quality by making different parts of the antibody have different properties: the CDR loops retain non-human sequences to maintain high binding affinity to PD1, while the framework regions are humanized to reduce immunogenicity. This selective humanization approach allows each region to optimize its function locally.

Inventive Principle:
Principle #3Local quality

3Adaptability or versatility

If basic CDR grafting is used, then humanization is achieved, but physical stability and immunogenicity risks remain

Engineering Contradiction:
ImprovehumanizationVSAvoidphysical stability
Core Design Contradiction:
Adaptability or versatilityVSReliability

Solution Approach 1:

The patent applies parameter changes by systematically evaluating and selecting specific framework residue substitutions that optimize both humanization and physical stability. The method involves testing multiple framework variants to identify those with improved stability characteristics while maintaining humanized status.

Inventive Principle:
Principle #35Parameter changes

4Measurement precision

If animal testing is used to assess immunogenicity, then preclinical data is obtained, but predictive accuracy for human immune response is low

Engineering Contradiction:
Improveimmunogenicity assessmentVSAvoidpredictive accuracy
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The patent replaces animal-based immunogenicity testing with in silico computational methods that predict human T-cell epitopes. This substitution uses bioinformatics algorithms to identify potential immunogenic regions based on human immune system characteristics, providing more accurate predictions for human clinical responses.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Data Source

PatentUS11851460B2PD1 binding agents
Publication Date: 2023.12.26 OTTIMO PHARMA LTD
  • US11851460B2 patent drawing
  • US11851460B2 patent drawing
  • US11851460B2 patent drawing

AI summary

Provided herein are antibody molecules that bind specifically to Programmed cell death 1 (PD1) and related nucleic acid molecules, vectors and host cells. Also provided herein are medical uses of such antibody molecules.