Solid Phase Peptide Synthesis Feedback Control

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Solution Overview

Problem

Current solid phase peptide synthesis systems lack advanced control over individual coupling reactions, leading to unintended side reactions and low yields, as they are unable to effectively identify and correct issues in real-time without complex and costly methods.

Innovation Solution

The implementation of a feedback control system that uses electromagnetic absorbance and emission detection to monitor reactions and modulate parameters such as flow rate, temperature, and reactant concentrations in real-time, allowing for immediate corrective actions during peptide synthesis.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Manufacturing precision

If conventional solid phase peptide synthesis is used, then peptide synthesis can be performed, but control over individual coupling reactions is insufficient leading to side reactions and low yields

Engineering Contradiction:
Improvecontrol over coupling reactionsVSAvoidyield and side reactions
Core Design Contradiction:
Manufacturing precisionVSReliability

Solution Approach 1:

The patent implements real-time feedback control by monitoring the effluent from the reactor using UV detection. The system detects coupling efficiency and deprotection completeness, then automatically adjusts reaction parameters (flow rate, reaction time, reagent concentration) to optimize each coupling step. This closed-loop feedback mechanism enables precise control over individual coupling reactions, reducing side reactions and improving overall yield.

Inventive Principle:
Principle #23Feedback

Solution Approach 2:

The patent replaces manual monitoring and adjustment of synthesis parameters with an automated electronic control system. UV detection and computer-controlled parameter modulation substitute for conventional mechanical or manual intervention, enabling real-time optimization of coupling reactions without human involvement in the adjustment process.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

2Manufacturing precision

If real-time monitoring and feedback control are implemented, then control precision is improved, but system complexity increases

Engineering Contradiction:
Improvereal-time control precisionVSAvoidsystem complexity
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

The patent introduces a UV detector as an intermediary component that monitors the reaction effluent and translates chemical information into detectable signals. This intermediary enables the control system to 'see' reaction progress without directly interfering with the synthesis chemistry, simplifying the control architecture while maintaining high precision.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The system monitors and adjusts multiple parameters (flow rate, reaction time, temperature, reagent concentration) based on real-time UV detection data. By dynamically changing these parameters in response to detected conditions, the system achieves high control precision without requiring complex hardware modifications to the core synthesis mechanism.

Inventive Principle:
Principle #35Parameter changes

3Reliability

If conventional synthesis monitoring methods are used, then side reactions can be detected, but correction cannot be made in real-time

Engineering Contradiction:
Improveside reaction detectionVSAvoidreaction correction time
Core Design Contradiction:
ReliabilityVSLoss of time

Solution Approach 1:

The system establishes a closed-loop feedback mechanism where UV detection of effluent provides real-time information about coupling efficiency and side reactions. The control system processes this information and immediately adjusts reaction parameters to correct issues during the synthesis process, eliminating the time delay inherent in conventional post-reaction analysis methods.

Inventive Principle:
Principle #23Feedback

Solution Approach 2:

The system performs preliminary detection of coupling efficiency and deprotection completeness before proceeding to the next synthesis step. By detecting potential side reactions early and adjusting parameters in advance, the system prevents cumulative errors and maintains high reliability throughout the synthesis sequence.

Inventive Principle:
Principle #10Preliminary action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach enables precise control over peptide synthesis, reducing side reactions, improving yields, and enabling the identification and correction of issues such as aggregation, truncation, and deletion, resulting in higher quality peptide production.

Implementation Method 1

detecting an electromagnetic absorbance and/or an electromagnetic emission of the fluid stream at a detection zone positioned downstream of the reactor to produce a signal

Methodology Applied
Scientific EffectElectromagnetic absorbance: Absorption (EM radiation)

Implementation Method 2

detecting an electromagnetic absorbance and/or an electromagnetic emission of the fluid stream at a detection zone positioned downstream of the reactor to produce a signal

Methodology Applied
Scientific EffectElectromagnetic emission: Luminescence

Data Source

PatentUS12043646B2Methods and systems for solid phase peptide synthesis
Publication Date: 2024.07.23 MASSACHUSETTS INST OF TECH
  • US12043646B2 patent drawing
  • US12043646B2 patent drawing
  • US12043646B2 patent drawing

AI summary

Methods and systems for control of solid phase peptide synthesis are generally described. Control of solid phase peptide synthesis involves the use of feedback from one or more reactions and/or processes (e.g., reagent removal) taking place in the solid phase peptide synthesis system. In some embodiments, a detector may detect one or more fluids flowing across a detection zone of a solid phase peptide synthesis system and one or more signals may be generated corresponding to the fluid(s). For instance, an electromagnetic radiation detector positioned downstream of a reactor may detect a fluid exiting the reactor after a deprotection reactor and produce a signal(s). In some embodiments, based at least in part on information derived from the signal(s), a parameter of the system may be modulated prior to and/or during one or more subsequent reactions and/or processes taking place in the solid phase peptide synthesis system. In some embodiments, the methods and systems, described herein, can be used to conduct quality control to determine and correct problems (e.g., aggregation, truncation, deletion) in reactions (e.g., coupling reactions) taking place in the solid phase peptide synthesis system.