Regulated Enoyl-CoA Hydratase Gene Expression for PHA Copolymer Control

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Solution Overview

Problem

Current methods for producing polyhydroxyalkanoate (PHA) copolymers with regulated monomer composition ratios are inefficient, leading to limited industrial applications due to instability in gene expression and lack of precise control over 3-hydroxyhexanoic acid (3HH) composition ratios, which affects the polymer's physical properties.

Innovation Solution

A microorganism with a (R)-specific enoyl-CoA hydratase gene expression regulated by modifying the nucleotide sequence upstream of the gene, allowing for controlled synthesis of PHA copolymers by adjusting the 3HH monomer pathway, enabling precise regulation of the 3HH composition ratio.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of operation

If the 3HV molar fraction in P(3HB-co-3HV) is increased to improve flexibility, then the polymer becomes more flexible, but the physical properties do not change as desirable and the polymer cannot be processed into soft-type products

Engineering Contradiction:
ImproveflexibilityVSAvoidphysical property control
Core Design Contradiction:
Ease of operationVSManufacturing precision

Solution Approach 1:

The patent changes the chemical composition parameters by introducing 3-hydroxyhexanoic acid (3HH) monomers into the PHA copolymer structure. By controlling the 3HH composition ratio through regulated enoyl-CoA hydratase gene expression, the patent achieves a different chemical parameter combination (3HB-co-3HH copolymer) that provides superior flexibility and processability compared to simply increasing 3HV content, thus resolving the contradiction between flexibility improvement and physical property control.

Inventive Principle:
Principle #35Parameter changes

2Ease of operation

If the (R)-specific enoyl-CoA hydratase gene is introduced to produce P(3HB-co-3HH) with improved flexibility, then the 3HH composition ratio can be increased, but gene expression is unstable and precise control over monomer composition ratio is difficult to achieve

Engineering Contradiction:
Improve3HH composition ratioVSAvoidgene expression stability
Core Design Contradiction:
Ease of operationVSReliability

Solution Approach 1:

The patent implements feedback control by modifying the nucleotide sequence upstream of the enoyl-CoA hydratase gene to create regulated expression. This allows the gene expression level to be controlled and stabilized, providing precise and reliable control over the 3HH composition ratio in the PHA copolymer, thus resolving the contradiction between achieving desired composition ratios and maintaining stable gene expression.

Inventive Principle:
Principle #23Feedback

Solution Approach 2:

The patent changes the genetic parameter by modifying the nucleotide sequence upstream of the enoyl-CoA hydratase gene. This sequence modification regulates gene expression levels and stabilizes the expression pattern, enabling precise control over the 3HH composition ratio while maintaining reliable and stable gene expression throughout the fermentation process.

Inventive Principle:
Principle #35Parameter changes

3Manufacturing precision

If wild-type Aeromonas caviae is used to produce P(3HB-co-3HH) by fermentation, then the 3HH composition ratio can reach 15-19 mol%, but the productivity is low and cell amount is insufficient for industrial application

Engineering Contradiction:
Improve3HH composition ratioVSAvoidpolymer productivity
Core Design Contradiction:
Manufacturing precisionVSProductivity

Solution Approach 1:

The patent segments the fermentation process into two distinct phases: a growth phase where cells are cultivated to high density, and a polymer accumulation phase where PHA copolymer is produced. This segmentation allows optimization of each phase independently - achieving high cell density first, then maximizing polymer productivity, thus resolving the contradiction between achieving precise 3HH composition ratios and improving overall polymer productivity for industrial application.

Inventive Principle:
Principle #1Segmentation

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach allows for the production of PHA copolymers with desirable monomer composition ratios, enhancing their industrial applicability by providing a range of physical properties from hard to soft, suitable for various applications.

Implementation Method 1

a microorganism in which (R)-specific enoyl-CoA hydratase gene expression is regulated... allowing for controlled synthesis of PHA copolymers by adjusting the 3HH monomer pathway

Methodology Applied
Scientific EffectEnzyme catalysis: Enzyme

Data Source

PatentEP3101129B1Microorganism having adjusted expression of r-specific enoyl-coa hydratase gene, and method for manufacturing polyhydroxyalkanoate copolymer using same
Publication Date: 2020.10.28 KANEKA CORP
  • EP3101129B1 patent drawing
  • EP3101129B1 patent drawing
  • EP3101129B1 patent drawing

AI summary

This invention relates to a microorganism that produces a polyhydroxyalkanoate (PHA) copolymer with a regulated monomer composition ratio and comprises a (R)-specific enoyl-CoA hydratase gene in the genome DNA, wherein a nucleotide sequence upstream of the (R)-specific enoyl-CoA hydratase gene comprises a modification consisting of a substitution(s), a deletion(s), an insertion(s), and/or an addition(s) of one or a plurality of nucleotides so that the expression of the (R)-specific enoyl-CoA hydratase gene is regulated, and to a method for producing a PHA copolymer using the microorganism.