Phosphoramidate Nucleotide Prodrugs for Liver Targeting

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Solution Overview

Problem

Current nucleoside monophosphates face challenges in efficiently being transported to therapeutic targets within cells, limiting their effectiveness as drug candidates, particularly due to the first phosphorylation step being rate-limiting when they reach the liver.

Innovation Solution

Development of novel phosphoramidate and cyclophosphate compounds that facilitate the delivery of monophosphate therapeutic agents, including unnatural nucleosides, by selectively targeting the liver through the hepatic portal vein, enhancing drug distribution and reducing side effects outside the liver.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If nucleoside monophosphates are used as drug candidates, then therapeutic effectiveness is limited, but the first phosphorylation step becomes rate-limiting when they reach the liver

Engineering Contradiction:
Improvetherapeutic effectivenessVSAvoidphosphorylation rate
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent applies preliminary action by pre-attaching the phosphate group to the nucleoside analog to form a monophosphate prodrug. This preliminary phosphorylation bypasses the rate-limiting first phosphorylation step that would normally occur in the liver, allowing the compound to be directly utilized by viral polymerases or undergo further metabolism without being constrained by hepatic phosphorylation kinetics

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent uses an intermediary approach by introducing a prodrug form (monophosphate ester) that serves as a mediator between the administered nucleoside analog and the active triphosphate form. This intermediary compound is designed to be selectively activated in target tissues (such as infected cells with high viral polymerase activity) rather than being rate-limited by liver phosphorylation, thereby improving therapeutic effectiveness while avoiding the productivity bottleneck of hepatic metabolism

Inventive Principle:
Principle #24Intermediary (Mediator)

2Quantity of substance

If prodrugs are designed to improve liver targeting, then drug distribution to liver is enhanced, but side effects outside the liver may increase

Engineering Contradiction:
Improvedrug distribution to liverVSAvoidside effects outside liver
Core Design Contradiction:
Quantity of substanceVSObject-affected harmful factors

Solution Approach 1:

The patent applies local quality by designing prodrugs with specific chemical structures (cyclophosphate or phosphoramidate esters) that confer selective stability and activation characteristics. These prodrugs are engineered to be selectively activated in liver tissue or in cells infected with virus, while remaining relatively stable in other tissues. The local quality is achieved through selective susceptibility to phosphatases or esterases present in target tissues, thereby enhancing liver targeting without proportionally increasing systemic side effects

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent employs parameter changes by modifying the chemical parameters of nucleoside analogs through prodrug conversion. The cyclophosphate and phosphoramidate esters alter the pharmacokinetic parameters including tissue distribution, metabolic stability, and activation kinetics. These parameter changes enable selective accumulation in liver tissue and controlled activation, improving the therapeutic index by enhancing efficacy in target tissue while limiting exposure and side effects in non-target tissues

Inventive Principle:
Principle #35Parameter changes

Data Source

PatentUS20240294565A1Unnatural configuration nucleotide prodrug compounds
Publication Date: 2024.09.05 LIGAND PHARMACEUTICALS INC
  • US20240294565A1 patent drawing
  • US20240294565A1 patent drawing
  • US20240294565A1 patent drawing

AI summary

Provided herein am phosphoramidate and cyclophosphate prodrug compounds of unnatural configuration nucleotide, their preparation, and their uses, such as treating liver diseases or nonliver diseases via intervening in the molecular pathways in the liver.