Photoactivatable Fluorescent Dye for STED Microscopy

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Solution Overview

Problem

Existing high-resolution fluorescence microscopy methods face limitations due to the photolabile nature of commonly used fluorescent dyes, which are often activated undesirably by high-intensity stimulation or fluorescence prevention light, leading to photoactivation and reduced applicability, especially in STED microscopy with short laser pulses.

Innovation Solution

The use of photoactivatable fluorescent dyes that undergo photoactivation in multiple light-induced reaction steps, ensuring fluorescence capability is established only after the final step, and are designed to be inert to stimulation or fluorescence prevention light, reducing unwanted photoactivation and allowing precise control over photoactivation.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If photoactivatable fluorescent dyes are used in high-resolution fluorescence microscopy, then spatial resolution is improved, but unintended photoactivation occurs due to sensitivity to high-intensity stimulation light

Engineering Contradiction:
Improvespatial resolutionVSAvoidphotoactivation stability
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The patent applies parameter changes by designing a two-step photoactivation process with distinct wavelength requirements. The first step uses light at a first wavelength to convert the dye from non-fluorescent to fluorescent state, while the second step uses light at a second wavelength to deactivate it. This wavelength parameter differentiation ensures that stimulation light at the second wavelength does not cause unintended photoactivation, thus improving reliability while maintaining high spatial resolution through controlled photoactivation states

Inventive Principle:
Principle #35Parameter changes

2Measurement precision

If high-intensity stimulation light is used in STED microscopy, then resolution is enhanced, but photobleaching of fluorophores increases

Engineering Contradiction:
ImproveresolutionVSAvoidfluorophore lifetime
Core Design Contradiction:
Measurement precisionVSDuration of action of stationary object

Solution Approach 1:

The patent applies preliminary action by pre-converting the fluorescent dye to a non-fluorescent state using light at the first wavelength before applying the high-intensity stimulation light. This preliminary conversion protects the fluorophore from photobleaching by the subsequent high-intensity stimulation light, as the dye is in a stable non-fluorescent state that is inert to the stimulation light. After stimulation, a second application of first-wavelength light restores the fluorescent state, enabling repeated measurement cycles without cumulative photobleaching damage

Inventive Principle:
Principle #10Preliminary action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach significantly enhances the stability of fluorescent dyes to high-intensity light, preventing unintended photoactivation and allowing for more precise control, thereby expanding the applicability of high-resolution fluorescence microscopy methods.

Implementation Method 1

the fluorophore is first formed from a protected, non-fluorescent form of the dye in a photoactivation reaction comprising at least two reaction steps

Methodology Applied
Scientific EffectPhotoactivation: Photodissociation

Implementation Method 2

The sample is scanned with focused excitation light and an intensity distribution of fluorescence-inhibiting light

Methodology Applied
Scientific EffectFluorescence: Fluorescence

Implementation Method 3

the intensity distribution of the stimulation light has a zero at the location of the excitation light intensity maximum. At locations of high intensity, the stimulation light prevents the fluorescent dye from emitting fluorescence

Methodology Applied
Scientific EffectStimulated emission:

Data Source

PatentEP4168778B1Method for locating individual molecules of a dye in a specimen and for generating high-resolution images of a structure in a specimen
Publication Date: 2024.07.31 ABBERIOR INSTR GMBH
  • EP4168778B1 patent drawingFigure 1
  • EP4168778B1 patent drawingFigure 2
  • EP4168778B1 patent drawingFigure 3

AI summary

The present invention relates to a method for generating high-resolution images of a structure in a specimen or for locating individual molecules of a fluorescent dye in a specimen and to the use of a fluorescent dye in a method of this kind. The method according to the invention is distinguished in that the fluorescent dye is initially formed from a protected, non-fluorescent form of the dye prior to the scanning with excitation and fluorescence preventing light in a photoactivation reaction comprising at least two reaction steps and that the protected, non-fluorescent form of the dye is inert to the excitation and fluorescence preventing light.