Plant Ptr1 Gene Construct for Pseudomonas Resistance

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Solution Overview

Problem

Current genetic resistance mechanisms in tomato plants, such as the Pto/Prf system, are becoming less effective against Pseudomonas syringae pv. tomato race 1 strains, leading to a need for new sources of resistance.

Innovation Solution

A nucleic acid construct comprising a Pseudomonas tomato race 1 (Ptr1) polynucleotide, a 5′ heterologous DNA promoter sequence, and a 3′ terminator sequence is used to transform plants, increasing expression of Ptr1 and conferring resistance to race 1 strains.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If the Pto/Prf resistance system is used in tomato plants, then resistance to Pst race 0 strains is achieved, but effectiveness against Pst race 1 strains is lost

Engineering Contradiction:
Improvedisease resistance effectivenessVSAvoidbroad-spectrum resistance coverage
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent introduces a new resistance gene Ptr1 that provides universal resistance against multiple Pst races (race 1 and intermediate strains) that were not effectively controlled by the Pto/Prf system. This multi-functional resistance mechanism expands the protective capability beyond the limitations of race-specific resistance.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The patent modifies the resistance profile by introducing a novel gene Ptr1 with different recognition specificity compared to Pto. This parameter change in the immune system's recognition capability allows detection of effectors (AvrRpt2, AvrRpt2B) that Pto cannot recognize, thereby changing the effectiveness parameters against different bacterial races.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If transgenic transformation is used to introduce Ptr1 gene, then disease resistance is conferred, but genetic modification complexity increases

Engineering Contradiction:
Improvedisease resistanceVSAvoidgenetic construct complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The genetic construct is segmented into functional modules: the Ptr1 coding sequence, a promoter region for expression control, and a terminator sequence. This segmentation allows for systematic assembly and verification of the transgenic construct, reducing the complexity of genetic modification processes.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent uses a nucleic acid construct as an intermediary vehicle to deliver the Ptr1 gene into plant cells. This construct acts as a mediator that facilitates the transfer and integration of the resistance gene, simplifying the transformation process compared to direct gene introduction methods.

Inventive Principle:
Principle #24Intermediary (Mediator)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The Ptr1 gene provides strong resistance to several race 1 Pst strains and recognizes the type III effector AvrRpt2, effectively inhibiting pathogen multiplication and conferring disease resistance.

Implementation Method 1

In the second immune response, plants use intracellular proteins (R proteins or nucleotide-binding oligomerization domain-like (NOD-like) receptors, NLRs) to detect pathogen effector proteins translocated inside the host cell during the infection process. NLR-triggered immunity (NTI) is typically associated with programed cell death and significant inhibition of pathogen multiplication

Methodology Applied
Scientific EffectNLR-triggered immunity (NTI):

Implementation Method 2

After translocation of AvrPto or AvrPtoB into the plant cell, Pto, which encodes a serine/threonine protein kinase, physically interacts with either one of these effectors and acts in concert with Prf, an NLR, to activate NTI

Methodology Applied
Scientific EffectEffector recognition and immune activation:

Data Source

PatentUS20250051795A1Enhanced disease resistance in plants
Publication Date: 2025.02.13 BOYCE THOMPSON INSTITUTE FOR PLANT RESEARCH INC
  • US20250051795A1 patent drawing
  • US20250051795A1 patent drawing
  • US20250051795A1 patent drawing

AI summary

Embodiments of the disclosure are directed to compositions and methods for enhancing disease resistance in plants. One aspect of embodiments of the disclosure relates to a nucleic acid construct comprising a nucleic acid molecule comprising a Pseudomonas tomato race 1 (Ptr1) polynucleotide, a 5′ heterologous DNA promoter sequence, and a 3′ terminator sequence, wherein the nucleic acid molecule, the DNA promoter sequence, and the terminator sequence are operatively coupled to permit transcription of the nucleic acid molecule. Methods of imparting disease resistance to a plant and methods of identifying a candidate plant suitable for breeding that displays enhanced disease resistance are also disclosed. Embodiments of the disclosure also include plant cells, plants, and plant seeds including a heterologous Pseudomonas tomato race 1 (Ptr1) polynucleotide.