Polycyclic LSD1 Inhibitor Structure Optimization

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Solution Overview

Problem

Current LSD1 inhibitors have limitations such as a narrow therapeutic window due to poor activity, making them unsuitable for effective treatment of LSD1-related diseases, and there is a need for a compound with high activity and superior druggability.

Innovation Solution

A novel compound of formula (I) is developed, which includes various ring structures and substituents, allowing for high activity and improved druggability as an LSD1 inhibitor, potentially enhancing therapeutic efficacy.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If existing LSD1 inhibitors are used, then LSD1-related diseases can be treated, but the therapeutic window is narrow due to poor activity

Engineering Contradiction:
Improvetherapeutic efficacyVSAvoidnarrow therapeutic window
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent applies parameter changes by modifying the chemical structure of LSD1 inhibitors through systematic variations in ring structures (aryl, heteroaryl, cycloalkyl, heterocycloalkyl), substitution patterns, and molecular configurations to optimize binding affinity and selectivity, thereby improving therapeutic efficacy while expanding the therapeutic window

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent employs composite material principles by creating complex polycyclic compound structures that combine multiple ring systems and functional groups, resulting in inhibitors with enhanced potency and improved pharmacological properties that address both efficacy and safety concerns

Inventive Principle:
Principle #40Composite materials

2Reliability

If existing LSD1 inhibitors are used, then some therapeutic effect can be achieved, but activity is poor and druggability is limited

Engineering Contradiction:
Improveinhibitor activityVSAvoiddruggability
Core Design Contradiction:
ReliabilityVSEase of manufacture

Solution Approach 1:

The patent systematically varies key structural parameters including ring size, heteroatom composition, substitution types and positions, and molecular rigidity to enhance both inhibitory activity and druggability properties such as solubility, permeability, and metabolic stability

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent introduces dynamic elements through flexible linkers and rotatable bonds in the molecular structure, allowing the inhibitor to adopt multiple conformations that facilitate binding to the LSD1 active site while maintaining synthetic accessibility and drug-like properties

Inventive Principle:
Principle #15Dynamics

Data Source

PatentUS20240216357A1Polycyclic compound and application thereof
Publication Date: 2024.07.04 SICHUAN HUIYU PHARMA
  • US20240216357A1 patent drawing
  • US20240216357A1 patent drawing
  • US20240216357A1 patent drawing

AI summary

Provided are a compound represented by general formula (I), or a tautomer, mesomer, racemate, enantiomer, diastereomer or mixture thereof, a deuterium isotopic derivative, pharmaceutically acceptable hydrate, solvate, salt, or eutectic thereof, a pharmaceutical composition thereof, and an application thereof in preparing a medicament for lysine specific demethylase 1 inhibitor-related diseases.