PRMT5 Inhibitor Compounds Selective Binding

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Solution Overview

Problem

Current therapies lack effective inhibitors for Protein Arginine Methyltransferase 5 (PRMT5), a key enzyme involved in various human diseases such as proliferative, metabolic, and blood disorders, which affects epigenetic regulation and gene expression.

Innovation Solution

Development of specific compounds, represented by Formula (I), that selectively inhibit PRMT5 activity, offering potential therapeutic benefits for PRMT5-mediated disorders by modulating its enzymatic function.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If PRMT5 inhibitors are developed to treat diseases, then therapeutic effectiveness is improved, but drug safety and toxicity concerns worsen

Engineering Contradiction:
Improvetherapeutic effectivenessVSAvoiddrug toxicity
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent modifies the chemical structure of PRMT5 inhibitors by changing parameters such as substituting aromatic rings with heteroaromatic rings, adjusting side chain lengths, and modifying functional groups. These parameter changes optimize the balance between binding affinity (therapeutic effectiveness) and off-target effects (toxicity), allowing selective inhibition of PRMT5 while minimizing harm to other biological systems.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If selective PRMT5 inhibition is achieved, then disease-specific treatment is improved, but off-target effects worsen

Engineering Contradiction:
ImproveselectivityVSAvoidoff-target effects
Core Design Contradiction:
ReliabilityVSObject-generated harmful factors

Solution Approach 1:

The patent introduces local quality modifications by adding specific functional groups or substituents at particular positions in the molecule that are critical for PRMT5 binding but not present in off-target proteins. This localized structural differentiation enables selective interaction with PRMT5's active site while avoiding binding to similar but non-target proteins, thereby reducing off-target effects.

Inventive Principle:
Principle #3Local quality

3Ease of manufacture

If compound structure is simplified, then synthesis ease is improved, but binding affinity worsens

Engineering Contradiction:
Improvesynthesis simplicityVSAvoidbinding affinity
Core Design Contradiction:
Ease of manufactureVSReliability

Solution Approach 1:

The patent divides the inhibitor molecule into distinct functional segments: a core scaffold providing structural stability, side chains responsible for binding affinity, and terminal groups affecting pharmacokinetics. This segmentation allows independent optimization of each component - simplifying the core for ease of synthesis while maintaining or enhancing side chain interactions with PRMT5 for binding affinity.

Inventive Principle:
Principle #1Segmentation

Data Source

PatentUS10150758B2PRMT5 inhibitors and uses thereof
Publication Date: 2018.12.11 EPIZYME INC
  • US10150758B2 patent drawing
  • US10150758B2 patent drawing
  • US10150758B2 patent drawing

AI summary

Described herein are compounds of Formula (I), pharmaceutically acceptable salts thereof, and pharmaceutical compositions thereof. Compounds of the present invention are useful for inhibiting PRMT5 activity. Methods of using the compounds for treating PRMT5-mediated disorders are also described.