Progranulin Variants with Modified C-Termini for Neurodegenerative Therapy

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Solution Overview

Problem

Current therapies fail to effectively address disorders associated with reduced progranulin levels or function, such as frontotemporal dementia, Alzheimer's Disease, and other neurodegenerative conditions, due to challenges in maintaining progranulin stability and delivery across the blood-brain barrier.

Innovation Solution

Development of progranulin variants with modified C-termini and fusion proteins linked to Fc polypeptides, which are less susceptible to cleavage and can maintain sortilin binding, facilitating increased progranulin levels and improved delivery across the blood-brain barrier.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If wild-type progranulin is used for therapy, then it can bind to sortilin, but it is susceptible to C-terminal cleavage which reduces its stability and effectiveness

Engineering Contradiction:
Improveprogranulin stabilityVSAvoidC-terminal cleavage
Core Design Contradiction:
ReliabilityVSObject-generated harmful factors

Solution Approach 1:

The patent applies parameter changes by modifying the amino acid sequence at the C-terminus of progranulin (specifically residues 574-576). The wild-type QLL sequence is replaced with alternative sequences such as QAL, QGL, QSL, QTL, QVL, QYL, or QRL. This sequence modification changes the chemical and structural parameters of the progranulin molecule, making it resistant to cleavage by proteases while preserving its ability to bind sortilin and exert therapeutic effects.

Inventive Principle:
Principle #35Parameter changes

2Quantity of substance

If progranulin levels are increased to treat neurodegenerative diseases, then therapeutic benefit is achieved, but delivery across the blood-brain barrier remains challenging

Engineering Contradiction:
Improveprogranulin levelsVSAvoidblood-brain barrier penetration
Core Design Contradiction:
Quantity of substanceVSObject-affected harmful factors

Solution Approach 1:

The patent employs fusion proteins that combine the modified progranulin with carrier molecules or peptides designed to facilitate blood-brain barrier penetration. These intermediary structures act as mediators that enable the progranulin to cross the blood-brain barrier while maintaining its therapeutic function. The fusion construct serves as a vehicle that overcomes the physiological barrier without altering the core progranulin sequence.

Inventive Principle:
Principle #24Intermediary (Mediator)

3Ease of manufacture

If current therapies are used for progranulin-related disorders, then treatment is provided, but they fail to effectively address the underlying cause due to progranulin instability

Engineering Contradiction:
Improvetherapy availabilityVSAvoidtherapeutic effectiveness
Core Design Contradiction:
Ease of manufactureVSReliability

Solution Approach 1:

The patent segments the progranulin molecule by identifying and modifying specific regions (the C-terminal residues 574-576) that are responsible for instability. By focusing modifications on this specific segment rather than the entire molecule, the patent maintains the functional integrity of progranulin while eliminating the vulnerable cleavage site. This targeted segmentation approach allows for effective therapy development.

Inventive Principle:
Principle #1Segmentation

Data Source

PatentUS20230265137A1Progranulin variants
Publication Date: 2023.08.24 DENALI THERAPEUTICS INC
  • US20230265137A1 patent drawing
  • US20230265137A1 patent drawing
  • US20230265137A1 patent drawing

AI summary

Provided herein are progranulin variants and fusion proteins that comprise a progranulin variant and an Fc polypeptide. Methods of using such proteins to treat progranulin-associated disorders (e.g., a neurodegenerative disease, such as frontotemporal dementia (FTD)) are also provided herein.