Protein A Elution pH Gradient Monomer Purity

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Solution Overview

Problem

Current methods for purifying proteins, particularly those with a CH2/CH3 region, face challenges in achieving high purity and efficiency due to aggregation, host cell impurities, and virus filter foulants, requiring multiple chromatography steps and resources, which increase processing time and cost.

Innovation Solution

A method involving binding polypeptides to Protein A and eluting with a pH gradient starting at or below 5.0, using a combination of high and low pH buffers to separate polypeptides from impurities, including aggregates, host cell impurities, and virus-like particles, while achieving high monomer purity and reducing the need for additional purification steps.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Manufacturing precision

If multiple chromatography techniques are used to separate proteins from impurities, then purification purity is improved, but processing time and cost increase

Engineering Contradiction:
Improvepurification purityVSAvoidprocessing time
Core Design Contradiction:
Manufacturing precisionVSLoss of time

Solution Approach 1:

The patent combines multiple separation mechanisms (affinity binding to Fc region, charge-based ion exchange, and hydrophobic interaction) into a single integrated Protein A resin system. This allows simultaneous removal of different impurity types (aggregates, host cell proteins, viruses) in one pass, eliminating the need for sequential chromatography steps and reducing processing time while maintaining high purity

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The Protein A resin is designed to perform multiple purification functions simultaneously: it captures target proteins via Fc region affinity, separates aggregates through size exclusion properties, removes host cell impurities via charge interactions, and eliminates viruses through hydrophobic interactions. This multi-functional approach replaces multiple specialized chromatography steps with a single versatile resin

Inventive Principle:
Principle #6Universality (Multi-functionality)

2Manufacturing precision

If multiple chromatography resins and sorbents are used for further purification, then separation accuracy is improved, but resource consumption and cost increase

Engineering Contradiction:
Improveseparation accuracyVSAvoidresource consumption
Core Design Contradiction:
Manufacturing precisionVSQuantity of substance

Solution Approach 1:

The patent integrates the functions of multiple different chromatography resins (affinity resin, ion exchange resin, hydrophobic interaction resin) into a single Protein A resin formulation. This consolidation reduces resource consumption by eliminating the need to purchase, store, and dispose of multiple separate resin types while maintaining the separation accuracy of each individual method

Inventive Principle:
Principle #5Merging (Combining)

3Manufacturing precision

If additional purification steps are performed to remove impurities, then product purity is improved, but device complexity increases

Engineering Contradiction:
Improveproduct purityVSAvoidprocess complexity
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

The patent merges multiple purification steps (affinity chromatography, ion exchange, hydrophobic interaction chromatography) into a single integrated process using Protein A resin. This reduces device complexity by eliminating multiple column connections, buffer exchanges, and process controls while achieving the same purity outcomes through the resin's multi-functional properties

Inventive Principle:
Principle #5Merging (Combining)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach achieves better separation of polypeptide monomers from impurities, resulting in higher purity and reduced processing time and costs, with the ability to be scaled for commercial processes and integrated with alternative downstream technologies.

Implementation Method 1

Protein A is a 41 kD cell wall protein from Staphylococcus aureas which binds with a high affinity (about 10−8 M to human IgG) to the Fc region of antibodies

Methodology Applied
Scientific EffectAffinity binding: Adsorption

Implementation Method 2

eluting with a pH gradient starting at or below 5.0

Methodology Applied
Scientific EffectIon exchange: Ion Exchange

Data Source

PatentUS9428548B2Enhanced protein purification through a modified protein A elution
Publication Date: 2016.08.30 F HOFFMANN LA ROCHE & CO AG
  • US9428548B2 patent drawing
  • US9428548B2 patent drawing
  • US9428548B2 patent drawing

AI summary

The present invention provides methods for purifying a polypeptide comprising a CH2/CH3 region, comprising binding the polypeptide to Protein A and eluting with a pH gradient starting at a low pH.