Protein A Elution Buffer Excipients Prevent Aggregation

Resolve Bottlenecks,
Find Innovative Solutions
Generate Solutions

Solution Overview

Problem

The biopharmaceutical industry faces challenges in reducing protein aggregation during low pH steps in downstream processing of monoclonal antibodies, which can lead to reduced product yield and stability issues, particularly in Protein A affinity chromatography and viral inactivation processes.

Innovation Solution

The use of neutral excipients such as disaccharides, polyols, and poly(ethylene glycol) polymers in the elution buffer during Protein A affinity chromatography prevents protein aggregation and precipitation, enhancing product yield and stability during low pH treatment without interfering with viral inactivation, allowing for their safe presence in pharmaceutical preparations.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If low pH treatment is used for viral inactivation and protein elution, then viral inactivation is achieved and protein is eluted from the column, but protein aggregation and precipitation occur reducing product yield

Engineering Contradiction:
Improveviral inactivationVSAvoidproduct yield
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

A stabilizing excipient is introduced as an intermediary substance that mediates between the low pH treatment and the protein. The excipient protects the protein from aggregation and precipitation caused by low pH conditions during both elution and viral inactivation, while not interfering with the viral inactivation process itself. This allows the beneficial low pH treatment to proceed without the harmful side effect of protein aggregation.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The chemical environment parameters are changed by adding stabilizing excipients to the low pH buffer. This modifies the physical-chemical conditions during low pH treatment to prevent protein denaturation and aggregation, while maintaining the pH level necessary for viral inactivation. The excipient changes the protein's stability parameters without changing the pH parameter itself.

Inventive Principle:
Principle #35Parameter changes

2Productivity

If stabilizing excipients are added to prevent protein aggregation, then product yield is improved, but the complexity of the elution buffer increases

Engineering Contradiction:
Improveproduct yieldVSAvoidelution buffer composition
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

Rather than changing the protein or the chromatography resin, the solution changes the buffer composition parameters by adding stabilizing excipients. These excipients are substances that are already commonly used in pharmaceutical formulations, so while they add to buffer complexity, they do not require entirely new materials or processes.

Inventive Principle:
Principle #35Parameter changes

3Object-affected harmful factors

If low pH conditions are applied during Protein A chromatography, then viral inactivation is achieved, but soluble high molecular weight aggregates and insoluble precipitates form

Engineering Contradiction:
Improveviral contaminationVSAvoidprotein structural stability
Core Design Contradiction:
Object-affected harmful factorsVSStability of the object's composition

Solution Approach 1:

The stabilizing excipient acts as a protective intermediary between the low pH conditions and the protein structure. It interferes with the aggregation process by occupying surfaces or forming protective complexes, preventing the protein from forming aggregates or precipitates under low pH stress, while allowing the low pH conditions to remain effective for viral inactivation.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The stabilizing excipient is added beforehand to the elution buffer to provide protective cushioning against the upcoming low pH stress. This pre-protection allows the protein to withstand the low pH conditions without aggregating, similar to how shock absorbers cushion against impact forces before they occur.

Inventive Principle:
Principle #11Beforehand cushioning (Prior cushioning)

Data Source

PatentUS20220348608A1Purification of proteins and viral inactivation
Publication Date: 2022.11.03 MERCK PATENT GMBH
  • US20220348608A1 patent drawing
  • US20220348608A1 patent drawing
  • US20220348608A1 patent drawing

AI summary

A method for purifying a target protein from a cell culture sample containing the target protein, viral compounds and other impurities, by affinity chromatography virus inactivation and optionally other purifications the affinity chromatography involvinga) loading an affinity chromatography column with the cell culture sample thereby binding the target protein to the affinity chromatography column;b) eluting the target protein from the affinity chromatography column by contacting the affinity chromatography column with an elution buffer having a pH<6 and comprising an excipient, wherein the excipient is disaccharides, polyols or poly (ethylene glycol) polymers;c) collecting one or more fractions containing the target protein obtained from (b);d) potentially combining the fractions obtained from (c) to form an elution product pool,and wherein the virus inactivation involvese) incubating the elution product pool at a pH from 2.5 to 4.5.