Purine Nucleoside Synthesis via Stereoselective Reduction

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Solution Overview

Problem

Current methods for synthesizing purine phosphoramidates, particularly 2′-deoxy-2′-fluoro-2′-C-methyl purine nucleosides, face challenges such as low yields, complex stereoselectivity, and high costs due to difficulties in forming the 2′ quaternary center and obtaining reactive α-halosugars, which hinder their use as effective inhibitors for Hepatitis C virus (HCV).

Innovation Solution

A process involving stereoselective reduction of a protected ribonolactone to a beta-lactol derivative and subsequent stereoselective conversion to an anomeric alpha-derivative, using hydride reducing agents and specific reagents, to produce compounds with improved beta-lactol and anomeric alpha configurations, enhancing the synthesis of purine nucleosides like compound I or II with specific substituents.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If conventional methods are used to synthesize purine phosphoramidates, then the synthesis can be completed, but the yields are poor and stereoselectivity is poor

Engineering Contradiction:
ImproveyieldVSAvoidstereoselectivity
Core Design Contradiction:
ProductivityVSManufacturing precision

Solution Approach 1:

The patent applies preliminary action by pre-forming the 2'-deoxy-2'-fluoro-2'-C-methyl ribose sugar component with the correct stereochemistry before the coupling step. The sugar is synthesized with the 2'-fluoro and 2'-C-methyl groups already in place with proper configuration, eliminating the need for difficult stereoselective control during the ribose-purine coupling step and achieving both high yield and excellent stereoselectivity.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent segments the synthesis into two independent parts: synthesis of the 2'-deoxy-2'-fluoro-2'-C-methyl ribose sugar component and synthesis of the purine phosphoramidate component, followed by coupling. This segmentation allows each component to be optimized independently, with the sugar component being pre-formed with correct stereochemistry, thereby resolving the contradiction between yield and stereoselectivity.

Inventive Principle:
Principle #1Segmentation

2Manufacturing precision

If α-halosugar is used to achieve desired β isomer enrichment, then stereoselectivity improves, but it is difficult to obtain the desired reactive α-halosugar in good yield without difficult purification steps

Engineering Contradiction:
ImprovestereoselectivityVSAvoiddifficulty of obtaining reactive α-halosugar
Core Design Contradiction:
Manufacturing precisionVSEase of manufacture

Solution Approach 1:

The patent avoids the need to obtain reactive α-halosugar by pre-forming the 2'-deoxy-2'-fluoro-2'-C-methyl ribose sugar with the correct stereochemistry through a different route. The sugar is synthesized with the 2'-fluoro and 2'-C-methyl groups already in place, eliminating the need for subsequent stereoselective transformation steps that would require difficult-to-obtain α-halosugars.

Inventive Principle:
Principle #10Preliminary action

3Manufacturing precision

If enzymatic glycosylation is used to achieve highly stereospecific coupling, then stereoselectivity improves, but the cost of synthesis increases due to need for specialized enzymes or genetic engineering

Engineering Contradiction:
ImprovestereospecificityVSAvoidcost
Core Design Contradiction:
Manufacturing precisionVSEase of manufacture

Solution Approach 1:

The patent employs conventional chemical reagents and methods instead of expensive specialized enzymes or genetically engineered enzymes. The synthesis uses standard organic chemistry transformations with readily available materials, achieving the desired stereoselectivity through carefully designed chemical steps rather than relying on costly enzymatic catalysts.

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach allows for the efficient synthesis of purine nucleosides with enhanced stereoselectivity and yield, potentially leading to more effective therapeutic agents against HCV by overcoming previous synthesis hurdles and cost issues.

Implementation Method 1

stereoselective reduction of a protected ribonolactone to a beta-lactol derivative

Methodology Applied
Scientific EffectReduction: Reduction

Implementation Method 2

subsequent stereoselective conversion to an anomeric alpha-derivative

Methodology Applied
Scientific EffectChemical conversion: Chemical Bonding

Data Source

PatentUS9045520B2Synthesis of purine nucleosides
Publication Date: 2015.06.02 GILEAD SCIENCES INC
  • US9045520B2 patent drawing
  • US9045520B2 patent drawing
  • US9045520B2 patent drawing

AI summary

A process for preparing phosphoramidate prodrugs or cyclic phosphate prodrugs of nucleoside derivatives, which is a compound, its stereoisomers, salts (acid or basic addition salts), hydrates, solvates, or crystalline forms thereof.