Resistant Microbe Detection via Fluorogenic Substrates

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Solution Overview

Problem

Current methods for detecting multi-resistant pathogens in clinical settings are time-consuming and expensive, often requiring extensive cultivation and molecular biological techniques, which are not suitable for rapid on-site analysis or initial screening, posing a risk for the transmission of these pathogens.

Innovation Solution

A method and device that detect multi-resistant germs by measuring enzymatic activity of proteins like DNase or hyaluronidase, using a sample carrier with antibiotics and a fluorophore-quencher system, allowing for quick identification of resistant pathogens without the need for cultivation, suitable for on-site use.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If conventional cultivation methods are used to detect multi-resistant pathogens, then detection accuracy is improved, but detection time increases significantly (days to weeks)

Engineering Contradiction:
Improvedetection accuracyVSAvoiddetection time
Core Design Contradiction:
Measurement precisionVSLoss of time

Solution Approach 1:

The patent applies preliminary action by pre-coating the sample carrier with multiple antibiotics and a fluorogenic substrate before sample application. This pre-preparation eliminates the need for time-consuming cultivation steps, as the detection reagents are already in place to immediately interact with any resistant pathogens present in the sample, enabling rapid detection within hours rather than days.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent replaces the mechanical/cultural system of pathogen cultivation with a chemical/direct detection system. Instead of relying on biological cultivation processes that require days of incubation, the method uses direct chemical interaction between antibiotics, fluorogenic substrates, and pathogen enzymes to produce immediate detectable signals, substituting a slow biological process with a faster chemical reaction-based detection.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

2Loss of time

If molecular biological techniques are used for pathogen detection, then detection speed is improved, but cost and device complexity increase

Engineering Contradiction:
Improvedetection timeVSAvoidequipment requirements
Core Design Contradiction:
Loss of timeVSDevice complexity

Solution Approach 1:

The patent employs disposable sample carriers that are pre-coated with antibiotics and fluorogenic substrates. These single-use carriers eliminate the need for expensive, complex molecular biology equipment while achieving rapid detection. The disposable nature ensures consistency and eliminates the need for costly instrumentation, making the method suitable for routine screening without specialized laboratories.

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Solution Approach 2:

The patent introduces fluorogenic substrates as intermediaries that bridge the gap between pathogen presence and detectable signal. These substrates remain inactive until contacted by specific pathogen enzymes, at which point they produce fluorescent signals that can be detected with simple equipment. This intermediary approach enables rapid detection without requiring complex molecular biological instrumentation.

Inventive Principle:
Principle #24Intermediary (Mediator)

3Measurement precision

If extensive cultivation and isolation procedures are used, then pathogen identification accuracy is improved, but productivity decreases

Engineering Contradiction:
Improvepathogen identification accuracyVSAvoidscreening throughput
Core Design Contradiction:
Measurement precisionVSProductivity

Solution Approach 1:

The patent applies universality by designing a sample carrier that simultaneously performs multiple functions: it contains multiple antibiotics to detect various resistance patterns, includes fluorogenic substrates for signal generation, and provides a solid support for sample application. This multi-functional design allows a single test to screen for multiple resistant pathogens and resistance mechanisms, dramatically increasing screening throughput while maintaining identification accuracy.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The patent merges multiple detection functions into a single integrated sample carrier. Instead of requiring separate cultivation, isolation, and identification steps that reduce productivity, the method combines antibiotic susceptibility testing and pathogen detection into one unified assay, enabling high-throughput screening without sacrificing identification accuracy.

Inventive Principle:
Principle #5Merging (Combining)

4Object-affected harmful factors

If rapid detection methods are used, then transmission risk is reduced, but detection reliability may worsen

Engineering Contradiction:
Improvepathogen transmission riskVSAvoiddetection reliability
Core Design Contradiction:
Object-affected harmful factorsVSReliability

Solution Approach 1:

The patent uses preliminary action by pre-coating the sample carrier with a comprehensive panel of antibiotics and fluorogenic substrates before sample application. This pre-preparation ensures that all necessary detection reagents are in place to reliably identify resistant pathogens, while the rapid format (hours versus days) reduces transmission risk. The pre-coated design maintains reliability by ensuring consistent reagent quality and coverage.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent replaces slow but reliable cultivation methods with a faster chemical reaction-based system using fluorogenic substrates. This substitution maintains detection reliability through specific enzyme-substrate reactions that produce clear fluorescent signals only when resistant pathogens are present, while dramatically reducing the time window for pathogen transmission.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

Enables rapid and cost-effective detection of multi-resistant pathogens, reducing the risk of transmission and allowing for immediate implementation of infection control measures, as it can identify resistant germs quickly and accurately without the need for extensive sample preparation or specialized equipment.

Implementation Method 1

a staining agent comprising a fluorophore and a quencher, which is cleaved by the protein, releasing the fluorophore

Methodology Applied
Scientific EffectFluorescence: Fluorescence

Data Source

PatentEP3077800B1Method and device for detecting resistant microbes
Publication Date: 2022.10.19 FRAUNHOFER GESELLSCHAFT ZUR FORDERUNG DER ANGEWANDTEN FORSCHUNG EV
  • EP3077800B1 patent drawingFigure 1
  • EP3077800B1 patent drawingFigure 2
  • EP3077800B1 patent drawingFigure 3A~3B

AI summary

The invention relates to a method for detecting resistant microbes (12) in a sample (14), having the step of contacting the sample with a sample carrier (16) which has an agent (18) for killing different microbes. The method further has the steps of introducing the sample carrier into an analyzing device (22) and detecting light emissions (24) from the sample carrier using the analyzing device. The analyzing device is used to output a display which indicates that the sample contains at least one microbe that is resistant against the agent for killing different microbes if the light emission exceeds a threshold or which indicates that the sample does not contain microbes that are resistant against the agent for killing different microbes if the light emission does not exceed the threshold.