Romidepsin Isolation Process Using Single-Solvent Crystallization

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Solution Overview

Problem

Existing processes for isolating romidepsin from fermentation broth are complex, requiring multiple chromatographic purification steps and resulting in inconsistent purity and high residual solvent content in crystalline forms.

Innovation Solution

A simplified process involving single solvent extraction and crystallization steps, including dissolution, precipitation, and recovery of romidepsin crystals without prior separation of broth ingredients, using solvents like toluene, methyl isobutyl ketone, and ethyl acetate, followed by silica gel column chromatography and crystallization in a single solvent system.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Manufacturing precision

If multiple chromatographic purification steps are used, then purity of romidepsin is improved, but process complexity and time consumption increase

Engineering Contradiction:
Improvepurity of romidepsinVSAvoidprocess complexity
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

The invention extracts romidepsin directly from the whole fermentation broth using organic solvents without requiring prior separation of broth ingredients. The extraction process selectively isolates romidepsin from the complex broth matrix, achieving high purity through a simplified single-step extraction followed by minimal chromatographic purification, thereby reducing overall process complexity while maintaining manufacturing precision

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The invention optimizes extraction parameters including solvent selection (ethyl acetate, methyl isobutyl ketone, toluene), pH control (adjusted to specific ranges for different extraction steps), temperature, and solvent-to-broth ratios. These parameter optimizations enable efficient romidepsin extraction with high purity in fewer steps, resolving the contradiction between purification effectiveness and process complexity

Inventive Principle:
Principle #35Parameter changes

2Manufacturing precision

If multiple chromatographic purification steps are used, then purity of romidepsin is improved, but time consumption increases

Engineering Contradiction:
Improvepurity of romidepsinVSAvoidtime consumption
Core Design Contradiction:
Manufacturing precisionVSLoss of time

Solution Approach 1:

The direct extraction of romidepsin from whole broth using organic solvents concentrates the target compound in a single step, eliminating the need for multiple sequential chromatographic purifications. This extraction approach achieves high purity romidepsin isolation significantly faster than traditional multi-step chromatographic methods

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The invention performs preliminary extraction and concentration of romidepsin from the fermentation broth before chromatographic purification. This preliminary action pre-concentrates the target compound and removes bulk impurities, thereby reducing the complexity and time required for subsequent purification steps while maintaining high final purity

Inventive Principle:
Principle #10Preliminary action

3Manufacturing precision

If traditional crystallization process is used, then crystals of romidepsin are obtained, but residual solvent content increases

Engineering Contradiction:
Improvecrystal purityVSAvoidresidual solvent content
Core Design Contradiction:
Manufacturing precisionVSLoss of substance

Solution Approach 1:

The invention optimizes crystallization parameters including solvent selection (methyl isobutyl ketone, toluene, ethyl acetate), temperature profiles (cooling rates, crystallization temperatures), and solvent ratios. These optimized parameters enable formation of high-quality romidepsin crystals with minimal residual solvent content while maintaining high purity, resolving the contradiction between crystal quality and solvent residue

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The invention uses the optimized single-solvent crystallization process to produce crystal forms that replicate the desired structural and purity characteristics without the solvent inclusion problems of traditional multi-solvent methods. The crystallization conditions are specifically designed to form crystals with low solvent incorporation, achieving both high purity and low residual solvent content

Inventive Principle:
Principle #26Copying

4Ease of manufacture

If whole broth extraction is used, then process simplicity is improved, but extraction efficiency must be maintained

Engineering Contradiction:
Improveprocess simplicityVSAvoidextraction efficiency
Core Design Contradiction:
Ease of manufactureVSProductivity

Solution Approach 1:

The invention optimizes extraction parameters including pH adjustment (to specific ranges for different extraction steps), solvent selection and ratios, temperature, and extraction time. These optimized parameters ensure high extraction efficiency of romidepsin from whole broth while maintaining the simplicity of the direct extraction approach without requiring prior broth component separation

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The invention uses pH adjustment as an intermediary control mechanism to optimize extraction efficiency. By controlling pH at specific values during extraction, the solubility and partitioning behavior of romidepsin is optimized, enabling efficient extraction from whole broth using simple organic solvent systems without complex pre-treatment steps

Inventive Principle:
Principle #24Intermediary (Mediator)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This process achieves purity greater than 99.5% of romidepsin with reduced time and cost, eliminating the need for multiple chromatographic steps and minimizing residual solvent content, resulting in a more efficient and cost-effective isolation method.

Implementation Method 1

extracting the fermentation broth with an organic solvent

Methodology Applied
Scientific EffectLiquid-liquid extraction: Liquid-Liquid Extraction

Implementation Method 2

evaporating the solvent to obtain a residue

Methodology Applied
Scientific EffectEvaporation: Evaporation

Implementation Method 3

crystallizing the product obtained in step d)

Methodology Applied
Scientific EffectCrystallization: Crystallisation

Data Source

PatentUS10294276B2Process for isolation of romidepsin from fermentation broth and preparation of crystals of romidepsin
Publication Date: 2019.05.21 CONCORD BIOTECH
  • US10294276B2 patent drawing
  • US10294276B2 patent drawing
  • US10294276B2 patent drawing

AI summary

The present invention describes a process for isolation of romidepsin from fermentation broth and preparation of crystals of romidepsin. The process of the invention includes fewer purification steps and provides romidepsin having purity of greater than 99.5% area by HPLC. The process of the invention involves simple purification steps and hence, does not require multiple chromatographic purification steps to achieve desired quality of romidepsin. The process is advantageous over reported processes in terms of 99.5% pure yield, fast process, less expensive and less cumbersome as multiple chromatographic purification is not necessary to achieve desired quality. The process for the preparation of crystals of romidepsin provides advantages like simple steps and involves use of single solvent. The process is advantageous in terms of time, cost, and simplicity.