Rotating Substrate Dispensing for Uniform Reagent Distribution

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Solution Overview

Problem

Current methods for sample analysis, such as in situ sequencing and hybridization, face challenges in providing precise reagents and maintaining sample quality, particularly due to the fragility of biological samples and the need for precise control over reagent distribution.

Innovation Solution

A system comprising a rotating device with a substrate that holds a sample and a liquid handler to disperse reagents evenly across the sample, using a retaining mechanism to secure the substrate and form an enclosed flow cell for improved sample preparation and analysis.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Manufacturing precision

If manual reagent application is used, then sample handling is simple, but reagent distribution is uneven and sample quality deteriorates

Engineering Contradiction:
Improvereagent distribution uniformityVSAvoidsystem complexity
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

The system employs a rotating substrate holder that dynamically rotates during reagent application. This rotational motion transforms the static manual application process into a dynamic automated system, ensuring uniform reagent distribution across the sample while maintaining manageable system complexity through a single degree of freedom rotation mechanism.

Inventive Principle:
Principle #15Dynamics

Solution Approach 2:

The rotating substrate holder automatically positions and distributes reagents across the sample without requiring manual intervention for each positioning step. The system serves itself by using the rotation mechanism to both hold and actively distribute the reagent, eliminating the need for complex multi-axis positioning systems.

Inventive Principle:
Principle #25Self-service

2Reliability

If conventional sample handling is used, then操作流程 is simple, but sample integrity is compromised

Engineering Contradiction:
Improvesample integrityVSAvoidoperational simplicity
Core Design Contradiction:
ReliabilityVSEase of operation

Solution Approach 1:

The rotating substrate holder provides dynamic control over sample positioning and reagent application timing. This controlled rotation allows precise management of sample exposure to reagents, maintaining sample integrity through standardized, repeatable handling procedures while keeping operation simple via automated rotation control.

Inventive Principle:
Principle #15Dynamics

Solution Approach 2:

The system changes the operational parameter from static manual handling to controlled rotational motion. This parameter change enables precise control over reagent application timing and distribution, improving sample integrity while maintaining ease of operation through automated parameter control.

Inventive Principle:
Principle #35Parameter changes

3Manufacturing precision

If excessive reagent is applied, then complete coverage is achieved, but reagent waste increases

Engineering Contradiction:
Improvereagent distribution controlVSAvoidreagent waste
Core Design Contradiction:
Manufacturing precisionVSLoss of substance

Solution Approach 1:

The rotating substrate holder enables dynamic control of reagent application by distributing a smaller volume of reagent uniformly across the sample during rotation. This eliminates the need to apply excess reagent for complete coverage, as the rotational motion ensures even distribution from a minimized reagent volume, reducing waste while maintaining precision.

Inventive Principle:
Principle #15Dynamics

4Productivity

If multiple manual application steps are used, then precise control is achieved, but processing time increases

Engineering Contradiction:
Improveprocessing speedVSAvoidreagent distribution control
Core Design Contradiction:
ProductivityVSManufacturing precision

Solution Approach 1:

The rotating substrate holder merges multiple manual application steps into a single automated rotational process. Instead of manually positioning and applying reagent in separate steps, the system combines holding, positioning, and distribution functions into one continuous rotation operation, improving processing speed while maintaining distribution control through automated motion.

Inventive Principle:
Principle #5Merging (Combining)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This system enhances sample deposition and conservation, ensuring even distribution of reagents and maintaining sample integrity, which is particularly beneficial for delicate biological samples and expensive reagents.

Implementation Method 1

The rotating device is configured to rotate at a speed sufficient to disperse the liquid within the well

Methodology Applied
Scientific EffectCentrifugal force: Centrifugal Force

Implementation Method 2

The retaining mechanism is configured to apply a vacuum force to a surface of the substrate thereby securing the substrate to the rotating device

Methodology Applied
Scientific EffectVacuum force: Vacuum

Data Source

PatentUS20230347312A1Systems and methods for liquid deposition
Publication Date: 2023.11.02 10X GENOMICS INC
  • US20230347312A1 patent drawing
  • US20230347312A1 patent drawing

AI summary

Systems and methods for dispensing a liquid on a substrate are disclosed. The system may be used to coat a substrate and/or a sample (e.g., a biological sample) with a liquid. The system includes a rotating device configured to rotate about an axis and a substrate disposed on the rotating device. The substrate comprises a well configured to hold a liquid and the substrate is positioned on a surface of the rotating device perpendicular to and concentric with the axis. The system further includes a liquid handler configured to dispense the liquid into the well. The rotating device is configured to rotate at a speed sufficient to disperse the liquid within the well.