Scanning Microscopy Resolution via Deconvolution

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Solution Overview

Problem

Conventional laser scanning microscopy is limited by the resolution due to the density of scanning positions, which requires a small pinhole leading to a poor signal-to-noise ratio and inefficient data recording speed, and Airy scan microscopy attempts to overcome this by denser scanning without reducing the pinhole size but still faces challenges with high data rates and noise performance.

Innovation Solution

The method involves illuminating a sample with diffraction-limited radiation, imaging it onto a surface detector with a point spread function, and displacing the illuminated point in multiple scanning directions to achieve overlapping scanning positions, allowing for increased resolution without the need for oversampling, using a scanning increment less than twice the full width at half maximum of the point spread function to maintain image quality and reduce data recording duration.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If the density of scanning positions is increased to improve resolution, then the pinhole must be reduced in size, but this leads to a poor signal-to-noise ratio and inefficient data recording

Engineering Contradiction:
Improvespatial resolutionVSAvoidsignal-to-noise ratio
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The patent replaces the mechanical pinhole aperture system with a mathematical deconvolution process. Instead of physically restricting light through a small pinhole to improve resolution, the system uses computational methods to reconstruct high-resolution images from lower-resolution scanning data, thereby maintaining signal intensity while achieving enhanced spatial resolution

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Solution Approach 2:

The patent changes the parameter of scanning position density from being directly tied to pinhole size to being independently controllable. By decoupling these parameters through computational reconstruction, the system can increase scanning position density for better resolution without the penalty of reduced signal-to-noise ratio that would result from smaller pinholes

Inventive Principle:
Principle #35Parameter changes

2Measurement precision

If the pinhole size is reduced to increase resolution, then the spatial resolution improves, but the data recording speed becomes inefficient

Engineering Contradiction:
Improvespatial resolutionVSAvoiddata recording speed
Core Design Contradiction:
Measurement precisionVSProductivity

Solution Approach 1:

The patent substitutes the mechanical constraint of pinhole size with a computational approach. By using deconvolution algorithms, the system achieves high spatial resolution without the need for small pinholes that would slow down data acquisition, thus maintaining efficient data recording speeds while improving resolution

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

3Measurement precision

If denser scanning positions are used to improve resolution, then the resolution increases, but the data rate becomes too high and noise performance deteriorates

Engineering Contradiction:
ImproveresolutionVSAvoidnoise performance
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The patent replaces the direct relationship between scanning density and resolution with a computational reconstruction system. By using deconvolution methods, the system can process lower-rate data from less dense scanning positions while still achieving high resolution, thereby avoiding the high data rates and associated noise performance deterioration that would result from densely sampled scans

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach enhances the resolution beyond conventional microscopy by generating more image pixels than scanning positions, reducing the time required to generate an image without increasing readout speed and maintaining signal quality, while avoiding ambiguity in depth-resolved imaging.

Implementation Method 1

the point is imaged along an optical axis and according to a point spread function into a diffraction image on a spatially resolving surface detector

Methodology Applied
Scientific EffectDiffraction: Diffraction

Implementation Method 2

an imaging beam path for diffraction-limited imaging of the point along an optical axis into a diffraction image

Methodology Applied
Scientific EffectFocusing: Focusing

Data Source

PatentUS11209636B2High-resolution scanning microscopy
Publication Date: 2021.12.28 CARL ZEISS MICROSCOPY GMBH
  • US11209636B2 patent drawing
  • US11209636B2 patent drawing

AI summary

A method for high-resolution scanning microscopy of a sample in which a sample is illuminated at a point in or on the sample by means of illumination radiation. The point is imaged along an optical axis and according to a point spread function into a diffraction image on a spatially resolving surface detector that comprises detector pixels in which a diffraction structure of the diffraction image is resolved. The point is displaced relative to the sample in at least two scanning directions and pixel signals are read from the detector pixels in various scanning posi- tions, wherein the pixel signals are respectively assigned to that scanning position at which they were read out and adjacent scanning positions overlap one another and are disposed according to a scanning increment. An image of the sample having a resolution that is increased beyond a resolution limit of the imaging is generated from the read pixel signals and the assigned scanning positions, wherein a deconvolution is carried out. Intermediate positions are generated for at least one of the scanning directions in the deconvolution on the basis of the pixel signals and the image of the sample, which contains more image points than scanning positions, is generated.