Shielding Element Mitigates Photodamage in Luminescent Sequencing

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Solution Overview

Problem

Current instruments for massively-parallel biological or chemical sample analysis are limited by their large size, lack of portability, requirement for skilled operation, high power consumption, and high cost, making them unsuitable for point-of-care applications and resulting in long wait times for analysis results.

Innovation Solution

An integrated device with a photodetection region and charge storage region configured to analyze samples using luminescent labels, where a shielding element is disposed between the reagent and the label to mitigate photodamage, allowing for the measurement of emission light characteristics such as wavelength, intensity, lifetime, pulse duration, and interpulse duration for efficient and accurate sample analysis.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If luminescent labels are used for sample analysis, then measurement precision is improved, but photodamage to the reagent occurs

Engineering Contradiction:
Improveaccuracy of sample analysisVSAvoidphotodamage to reagent
Core Design Contradiction:
Measurement precisionVSObject-affected harmful factors

Solution Approach 1:

A shielding element is positioned between the luminescent label and the reagent to block harmful light from reaching the reagent. This intermediary component allows the luminescent label to emit light for detection while preventing photodamage to the reagent, thereby maintaining both measurement precision and reagent integrity.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Measurement precision

If conventional analysis instruments are used, then measurement precision is improved, but device size and portability are worsened

Engineering Contradiction:
Improveaccuracy of analysis resultsVSAvoidportability of instrument
Core Design Contradiction:
Measurement precisionVSWeight of moving object

Solution Approach 1:

Multiple functional components (light source, sample chamber, detection system, and shielding elements) are integrated into a single compact device. This merging of functions maintains measurement precision while significantly reducing device size and improving portability for point-of-care applications.

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The device employs a nested structure where the sample chamber is positioned within the housing, the shielding element is integrated within the chamber structure, and detection components are embedded in the housing. This nesting approach maximizes functional density while minimizing overall device footprint.

Inventive Principle:
Principle #7Nested doll (Nesting)

3Measurement precision

If conventional analysis instruments are used, then measurement precision is improved, but wait time for results is worsened

Engineering Contradiction:
Improveaccuracy of analysis resultsVSAvoidwait time for results
Core Design Contradiction:
Measurement precisionVSLoss of time

Solution Approach 1:

The device enables continuous measurement by using photodetectors that continuously detect luminescent emission from the sample. The integrated design allows immediate analysis without sample transfer or preparation steps, providing rapid results while maintaining measurement precision.

Inventive Principle:
Principle #20Continuity of useful action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

Enables compact, portable, and user-friendly analysis of samples, reducing wait times and improving the accuracy of genetic sequencing and other biological analyses by effectively utilizing luminescent labels and shielding elements to enhance data collection from samples.

Implementation Method 1

at least one photodetection region configured to generate charge carriers responsive to incident photons emitted from a sample

Methodology Applied
Scientific EffectPhotoelectric Effect: Photoelectric Effect

Implementation Method 2

a sample that emits emission light in response to excitation light

Methodology Applied
Scientific EffectFluorescence: Fluorescence

Data Source

PatentUS20230221253A1Techniques for sequencing
Publication Date: 2023.07.13 QUANTUM SI INC
  • US20230221253A1 patent drawing
  • US20230221253A1 patent drawing
  • US20230221253A1 patent drawing

AI summary

Techniques for multi-dimensional signal analysis are described herein. The techniques may be used in one or more sequencing applications. For example, according to some aspects, there is provided a method comprising: determining information about a sample that emits emission light in response to excitation light based on at least one of pulse duration and interpulse duration and at least two of wavelength, intensity, and lifetime of the emission light, wherein the sample comprises a reagent configured to be coupled to a luminescent label, and wherein a shielding element is disposed between the reagent and the luminescent label.