Solid Protein Standard Mixture Stability

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Solution Overview

Problem

Protein standards used in proteomics are prone to degradation and fragmentation, leading to instability and challenges in storage and handling, which affects the accuracy of protein quantification in mass spectrometry and other proteomics applications.

Innovation Solution

A solid mixture comprising internal standard proteins and chaotropic agents such as urea, guanidine, or thiourea, which provides improved stability and ease of use by minimizing solvent volume and preventing degradation during storage and transportation.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of operation

If internal standard proteins are stored in soluble format, then ease of use is improved, but stability deteriorates due to denaturation or fragmentation

Engineering Contradiction:
Improveease of useVSAvoidprotein stability
Core Design Contradiction:
Ease of operationVSStability of the object's composition

Solution Approach 1:

The patent changes the physical state parameter of the internal standard protein from soluble (liquid) format to solid format (lyophilized or freeze-dried). This parameter change fundamentally alters the stability characteristics while maintaining ease of use through simple reconstitution by adding solvent before analysis.

Inventive Principle:
Principle #35Parameter changes

2Measurement precision

If internal standards are added to sample in soluble format, then measurement precision is improved, but loss of substance occurs due to degradation

Engineering Contradiction:
Improvequantification accuracyVSAvoidprotein degradation
Core Design Contradiction:
Measurement precisionVSLoss of substance

Solution Approach 1:

The patent applies preliminary action by preparing the internal standard protein in a stable solid format before use. The protein is lyophilized or freeze-dried in advance, creating a stable form that prevents degradation during storage and handling. The standard is then reconstituted immediately before addition to the sample, ensuring maximum stability and minimizing loss throughout the workflow.

Inventive Principle:
Principle #10Preliminary action

3Stability of the object's composition

If protein standards are handled with great care to prevent denaturation, then stability is improved, but device complexity increases

Engineering Contradiction:
Improveprotein stabilityVSAvoidhandling complexity
Core Design Contradiction:
Stability of the object's compositionVSDevice complexity

Solution Approach 1:

The patent adopts the approach of using pre-prepared, stable solid standard proteins that can be stored indefinitely without special handling. The lyophilized or freeze-dried format creates a stable, disposable-like standard that eliminates the need for complex cold chains, protective containers, or specialized handling procedures throughout storage and transport.

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The solid mixture maintains protein stability over time and temperature fluctuations, reducing systematic errors in protein quantification and enabling accurate determination of target proteins in samples.

Implementation Method 1

Chaotropic agents are molecules that are able to disrupt the hydrogen bonding network between water molecules

Methodology Applied
Scientific EffectChaotropic effect:

Data Source

PatentUS20240012000A1Solid mixture comprising standard protein
Publication Date: 2024.01.11 PROTEOMEDGE AB
  • US20240012000A1 patent drawing
  • US20240012000A1 patent drawing
  • US20240012000A1 patent drawing

AI summary

Disclosed are a mixture comprising at least one internal standard protein, a container comprising the mixture, a method for preparing a container with the mixture, a method for determining the amount of a target protein present in a sample, providing a container comprising the mixture, as well as a kit for carrying out the methods.