Solid-Supported N-Hydroxyphthalimide for Nucleoside Synthesis

Resolve Bottlenecks,
Find Innovative Solutions
Generate Solutions

Solution Overview

Problem

Current methods for synthesizing 3′-O-amino-2′-deoxyribonucleoside-5′-triphosphate are complex and require multiple steps, including solution-based processes that complicate purification due to the presence of phosphine, which converts into phosphine oxide during Mitsunobu reactions.

Innovation Solution

A method utilizing a solid support functionalized with an N-hydroxyphthalimide moiety for the synthesis of 3′-O-amino-2′-deoxyribonucleoside-5′-triphosphate, where the N-hydroxyphthalimide moiety is used to protect the 3′-O-amino group throughout the process, reducing the number of protection/deprotection steps and simplifying purification by maintaining the compound in suspension rather than solution.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of manufacture

If solution-based Mitsunobu reactions are used to protect the 3'-hydroxy group, then the amino group can be introduced, but phosphine oxide formation complicates purification

Engineering Contradiction:
Improveprotection of 3'-hydroxy groupVSAvoidphosphine oxide formation
Core Design Contradiction:
Ease of manufactureVSObject-generated harmful factors

Solution Approach 1:

The harmful phosphine oxide byproduct is extracted from the reaction system by using solid-supported reagents, allowing it to be separated from the desired product through simple filtration rather than complex purification steps

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

A solid support acts as an intermediary carrier for the Mitsunobu reagents, enabling the reaction to proceed while facilitating easy separation of byproducts from the product through physical filtration

Inventive Principle:
Principle #24Intermediary (Mediator)

2Manufacturing precision

If multiple protection/deprotection steps are used in solution-phase synthesis, then selectivity can be controlled, but the number of synthesis steps increases

Engineering Contradiction:
Improveselectivity of hydroxy group modificationVSAvoidnumber of protection/deprotection steps
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

Multiple protection and functionalization steps are merged into a single solid-supported operation, where the solid support simultaneously protects the 3'-hydroxy group and enables selective modification of the 5'-hydroxy group

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The 3'-hydroxy group is preliminarily protected by grafting onto the solid support before any other modifications, preventing unwanted reactions at this position throughout the subsequent synthesis steps

Inventive Principle:
Principle #10Preliminary action

3Ease of manufacture

If solution-based synthesis is used, then reactions can proceed in homogeneous phase, but purification becomes more difficult

Engineering Contradiction:
Improvereaction homogeneityVSAvoidpurification difficulty
Core Design Contradiction:
Ease of manufactureVSObject-generated harmful factors

Solution Approach 1:

The reaction system is segmented into solid and liquid phases, with reactants and products anchored on solid support particles, allowing simple separation by filtration while maintaining reaction efficiency

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The physical state of the reaction system is changed from homogeneous solution to heterogeneous suspension, fundamentally altering the separation and purification characteristics while maintaining chemical reactivity

Inventive Principle:
Principle #35Parameter changes

Data Source

PatentUS12065461B2Method for preparing 3′-O-amino-2′-deoxyribonucleoside-5′-triphosphate
Publication Date: 2024.08.20 DNA SCRIPT SAS
  • US12065461B2 patent drawing
  • US12065461B2 patent drawing
  • US12065461B2 patent drawing

AI summary

The invention relates to a method for preparing 3′-O-amino-2′-deoxyribonucleoside-5′-triphosphate. It also relates to a solid support functionalized with at least one N-hydroxyphthalimide moiety and uses thereof for protecting 3′-hydroxy group of a 2′-deoxyribonucleoside during synthesis of a nucleoside or a derivative thereof.