Soybean IDC Tolerance Marker Selection

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Solution Overview

Problem

Current methods for determining soybean cultivar tolerance to iron deficiency chlorosis (IDC) are inefficient, relying on phenotypic analysis in field or greenhouse conditions, which is time-consuming and not practical for large-scale selection.

Innovation Solution

Identification and selection of soybean plants using genetic markers associated with IDC tolerance, such as specific alleles and haplotypes located on various chromosomes, allowing for molecular analysis to characterize cultivars for IDC tolerance.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If phenotypic analysis in field or greenhouse conditions is used to determine IDC tolerance, then accurate tolerance assessment can be achieved, but the process becomes time-consuming and inefficient

Engineering Contradiction:
ImproveIDC tolerance assessment accuracyVSAvoidtime-consuming field testing
Core Design Contradiction:
Measurement precisionVSLoss of time

Solution Approach 1:

The patent uses molecular markers as genetic copies or indicators that represent the IDC tolerance trait. Instead of directly observing the phenotypic expression of tolerance in field conditions, the invention detects specific molecular marker profiles (such as SNP alleles or SSR patterns) that are genetically linked to IDC tolerance. This molecular copying approach allows rapid identification of tolerant cultivars without time-consuming phenotypic evaluation, resolving the contradiction between assessment accuracy and time efficiency.

Inventive Principle:
Principle #26Copying

2Reliability

If field or greenhouse testing is conducted to evaluate IDC tolerance, then reliable tolerance data can be obtained, but the complexity and resource requirements increase

Engineering Contradiction:
ImproveIDC tolerance determination reliabilityVSAvoidtesting system complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent replaces the mechanical and environmental complexity of field/greenhouse testing systems with a molecular biology-based detection system. Instead of manipulating plants in controlled growth environments and observing phenotypic responses, the invention uses DNA extraction, PCR amplification, and marker detection techniques to directly assess IDC tolerance genetics. This substitution maintains reliability by detecting the actual genetic basis of tolerance while dramatically reducing system complexity and resource requirements.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

3Productivity

If molecular markers are used for IDC tolerance identification, then rapid and accurate selection is enabled, but the requirement for specific chromosomal intervals and allele detection increases

Engineering Contradiction:
Improvevarietal selection speedVSAvoidmarker detection complexity
Core Design Contradiction:
ProductivityVSDifficulty of detecting and measuring

Solution Approach 1:

The patent applies local quality by focusing detection efforts on specific chromosomal regions and markers known to be associated with IDC tolerance. Rather than analyzing the entire genome or requiring complex multi-locus assessments, the invention identifies and detects specific molecular markers (such as SNPs at particular chromosomal positions or SSR patterns in specific regions) that are locally linked to tolerance genes. This localized approach enables rapid productivity gains while managing detection complexity by concentrating resources on key genomic regions.

Inventive Principle:
Principle #3Local quality

Data Source

PatentUS10544470B2Resistance alleles in soybean
Publication Date: 2020.01.28 SYNGENTA CROP PROTECITON AG
  • US10544470B2 patent drawing

AI summary

The present invention relates to methods and compositions for identifying, selecting and/or producing a soybean plant or germplasm having iron deficiency chlorosis tolerance. A soybean plant, part thereof and/or germplasm, including any progeny and/or seeds derived from a soybean plant or germplasm identified, selected and/or produced by any of the methods of the present invention is also provided.