Soybean Genetic Transformation Using PMI Selectable Marker

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Solution Overview

Problem

The use of antibiotic and herbicide resistance genes as selectable markers in genetic transformation of soybeans poses environmental risks and is inefficient, with the 6-phosphomannose isomerase (PMI) gene being ineffective due to high endogenous expression in dicotyledon plants, limiting its application in soybean genetic transformation.

Innovation Solution

A soybean genetic transformation method using PMI as a selectable marker, involving soaking soybean explants in a recombinant Agrobacterium-containing infection suspension, co-culturing, and culturing on a selective medium with mannose to inhibit non-transformed cell growth, allowing transformed cells to grow normally.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Object-affected harmful factors

If PMI gene is used as selectable marker in soybean transformation, then environmental safety is improved, but transformation efficiency deteriorates due to high endogenous expression

Engineering Contradiction:
Improveenvironmental safetyVSAvoidtransformation efficiency
Core Design Contradiction:
Object-affected harmful factorsVSProductivity

Solution Approach 1:

The patent extracts the PMI gene from the soybean genome by using a soybean-specific promoter (GmPMI promoter) that is inactive in transformed cells, thereby eliminating the interference of endogenous PMI expression while maintaining environmental safety benefits

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent applies local quality by using tissue-specific or condition-specific promoters to drive PMI expression only in transformed cells under specific conditions, allowing differential expression between transformed and non-transformed cells despite high background expression in soybean

Inventive Principle:
Principle #3Local quality

2Productivity

If antibiotic or herbicide resistance genes are used as selectable markers, then transformation selection is improved, but environmental safety deteriorates due to toxicity and horizontal gene transfer

Engineering Contradiction:
Improvetransformation selection efficiencyVSAvoidenvironmental safety
Core Design Contradiction:
ProductivityVSObject-affected harmful factors

Solution Approach 1:

The patent converts the normally harmful or neutral mannose substance into a beneficial selective agent by coupling it with PMI gene expression, where mannose becomes toxic only to non-transformed cells that lack the transgenic PMI enzyme, thereby eliminating the need for toxic antibiotics or herbicides

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

Solution Approach 2:

The patent introduces PMI gene as an intermediary that enables cells to metabolize mannose, creating a bridge between the safe substance (mannose) and effective selection, where the PMI enzyme acts as the mediator that confers resistance to mannose toxicity

Inventive Principle:
Principle #24Intermediary (Mediator)

3Object-affected harmful factors

If traditional selectable markers are replaced with PMI gene, then environmental impact is reduced, but additional transformation experiments are required increasing labor and cost

Engineering Contradiction:
Improveenvironmental impactVSAvoidlabor and production costs
Core Design Contradiction:
Object-affected harmful factorsVSLoss of time

Solution Approach 1:

The patent merges the selection marker function with the endogenous metabolic pathway by using the soybean-specific PMI promoter to drive PMI expression, combining the selectable marker function with native soybean gene regulation to eliminate the need for separate verification experiments

Inventive Principle:
Principle #5Merging (Combining)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This method achieves a transformation frequency of 1.9% to 6.3% for different soybean cultivars, overcoming the limitations of traditional PMI gene use and providing a safe and efficient genetic transformation process.

Implementation Method 1

mannose cannot be absorbed and utilized directly by plants until it is isomerized to fructose 6-phosphate by 6-phosphomarmose isomerase

Methodology Applied
Scientific EffectEnzyme catalysis: Enzyme

Implementation Method 2

soaking soybean explants in a recombinant Agrobacterium-containing infection suspension to obtain infected explants

Methodology Applied
Scientific EffectGenetic transformation:

Implementation Method 3

regulation of a ratio of mannose to sucrose in a culture medium can starve non-transformed plant cells, making transformed cells grow normally

Methodology Applied
Scientific EffectMetabolic inhibition:

Data Source

PatentUS11761010B2Soybean genetic transformation method using PMI as selectable gene
Publication Date: 2023.09.19 INSTITUTE OF CROP SCIENCE CHINESE ACADEMY OF AGRICULTURAL SCIENCES
  • US11761010B2 patent drawing

AI summary

The present invention provides a soybean genetic transformation method using PMI as selectable gene, and relates to the technical field of genetic engineering. In the soybean genetic transformation method of the present invention, using the PMI gene as a selectable marker, soybean explants are infected by recombinant Agrobacterium with the PMI gene and a target gene, followed by co-culture; without recovery culture, the co-cultured explants are directly selected by a selective medium supplemented with mannose, where transformed explants with the PMI gene grow normally under selection pressure of mannose, while non-transformed explant growth is inhibited, thereby selecting successfully transformed positive plants; after shoot elongation and transplantation of the positive plants obtained, genetically transformed soybean plants are obtained successfully. Using the soybean genetic transformation method as provided by the present invention, soybeans can be genetically transformed by PMI genes derived from any species, achieving safe soybean genetic transformation.