Spirocyclic Dihydropyranopyrimidine KRAS Inhibitors for Mutant KRAS Binding

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Solution Overview

Problem

Current therapies targeting KRas signaling in cancer cells are limited, as KRas is considered undruggable due to its intrinsic GTPase activity deficiency and insensitivity to GTPase-activating proteins, leading to increased KRas signaling in various human cancers.

Innovation Solution

Development of spirocyclic dihydropyranopyrimidine compounds that inhibit dysregulated KRas proteins, including mutant forms, by specifically binding to KRas and modulating its activity.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional therapies are used to target KRas signaling, then treatment options are available for some cancers, but KRas inhibition is ineffective due to intrinsic GTPase activity deficiency and insensitivity to GTPase-activating proteins

Engineering Contradiction:
ImproveKRas inhibition efficacyVSAvoidKRas resistance to GTPase-activating proteins
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent employs parameter changes by designing spirocyclic dihydropyranopyrimidine compounds with specific molecular structures (Formula I, II, III, IV, V, or A) that alter the binding parameters to KRas, enabling effective inhibition despite KRas's intrinsic resistance to conventional GTPase-activating proteins. The compounds feature specific substituents (R1, R2, R3, R4, R5, R6, R7, R8, R9, R10) and ring structures that modify interaction parameters with KRas to overcome its GTPase activity deficiency.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The spirocyclic dihydropyranopyrimidine compounds act as intermediary molecules that bridge the gap between conventional therapy and KRas inhibition. These compounds directly bind to KRas and modulate its activity, serving as a mediator that overcomes KRas's insensitivity to GTPase-activating proteins by providing an alternative inhibition mechanism through specific molecular recognition and binding.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Reliability

If KRas is considered undruggable due to its intrinsic properties, then GTPase activity cannot be effectively inhibited, but spirocyclic dihydropyranopyrimidine compounds can specifically bind and inhibit KRas activation

Engineering Contradiction:
ImproveKRas inhibition effectivenessVSAvoidDrug development feasibility
Core Design Contradiction:
ReliabilityVSEase of manufacture

Solution Approach 1:

The patent applies segmentation by dividing the complex challenge of KRas inhibition into manageable structural components. The spirocyclic dihydropyranopyrimidine compounds are designed with segmented structures including a dihydropyranopyrimidine core, spirocyclic moieties, and various substituent groups (R1-R10) that can be independently optimized. This segmentation allows systematic development of KRas inhibitors by modifying individual structural elements to enhance binding affinity and selectivity.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent employs composite materials principles by creating spirocyclic dihydropyranopyrimidine compounds that combine multiple functional structural elements into a single therapeutic molecule. The compounds integrate a dihydropyranopyrimidine core with spirocyclic structures and various heterocyclic or hydrocarbon substituents, forming a composite molecular architecture that achieves effective KRas inhibition through synergistic interactions of different structural components.

Inventive Principle:
Principle #40Composite materials

3Reliability

If KRas has intrinsic GTPase activity deficiency, then sustained KRas activation occurs leading to cancer progression, but spirocyclic dihydropyranopyrimidine compounds can modulate KRas activity to treat KRas-associated cancers

Engineering Contradiction:
ImproveTherapeutic benefit for KRas-associated cancersVSAvoidSustained KRas activation time
Core Design Contradiction:
ReliabilityVSDuration of action of stationary object

Solution Approach 1:

The patent applies preliminary action by designing spirocyclic dihydropyranopyrimidine compounds that proactively bind to KRas and prevent sustained activation before it can drive cancer progression. The compounds are structured to preemptively inhibit KRas GTPase activity by forming stable complexes with KRas, thereby preventing the prolonged GTP-bound state that leads to uncontrolled cell growth and cancer development.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent converts the harmful intrinsic GTPase activity deficiency of KRas into a therapeutic opportunity. By designing compounds that specifically exploit KRas's structural characteristics and binding properties, the spirocyclic dihydropyranopyrimidine compounds transform KRas's resistance to conventional inhibition into a target for selective drug binding, enabling effective treatment of KRas-associated cancers through structure-based drug design.

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

Data Source

PatentUS20260022132A1Spirocyclic dihydropyranopyrimidine KRAS inhibitors
Publication Date: 2026.01.22 TREELINE BIOSCIENCES INC
  • US20260022132A1 patent drawing
  • US20260022132A1 patent drawing
  • US20260022132A1 patent drawing

AI summary

Provided herein are compounds of Formula (II) (e.g., Formula (II-a), (II-b), (II-a1), (II-b1), (II-a2), (II-b2), (II-3), (II-a3), (II-4), (II-a4), (II-5), (II-a5), (II-6), (II-a6), (II-7), (II-a7), (II-7), or (II-a8)), Formula (III) (e.g., Formula (III-1), (III-2), (III-3), (III-4), (III-5), (III-6), (III-7), or (III-8)), Formula (IV) (e.g., Formula (IV-a), (IV-b), (IV-c), (IV-a1), (IV-b1), (IV-a2), (IV-b2), (IV-a3), (IV-b3), (IV-a4), (IV-b4), (IV-a5), (IV-b5), (IV-a6), (IV-b6), (IV-a7), (IV-b7), (IV-a8), or (IV-b8)), Formula (V) (e.g., Formula (V-a) or (V-b), (V-a1), (V-c), (V-d), (V-b1), (V-a2), (V-b2), (V-a3), or (V-b3)), Formula (VI) (e.g., Formula (VI-a), (VI-b), (VI-c), (VI-d), or (VI-e))), or Formula (A) (e.g., Formula (I-a1)), or pharmaceutically acceptable salts thereof, that inhibit a KRas protein (e.g., a dysregulated KRas protein (e.g., a mutated or amplified KRas protein)). This disclosure also provides compositions containing the compounds as provided herein, or pharmaceutically acceptable salts thereof, as well as methods of using and making the same.